Gene Information

Name : HSM_1690 (HSM_1690)
Accession : YP_001785010.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1938981 - 1939922 bp
Length : 942 bp
Strand : +
Note : PFAM: protein of unknown function DUF1527; KEGG: hso:HS_1775 hypothetical protein

DNA sequence :
ATGAAAAAAACGTTTCTTACGATACTGATCTCTGCCAGTTTAGCTGTCCCAACAACCTTATATCCTCAACCAGCCAGAGC
CTCATTGAATACCGCTTCCATTGCTGCATCAAGTGCCTCAACAAGCTGTTTGGAATATAAAGTTGTTGGAACCTGTTTTT
GGTTATTTTGTACCTACTTTGGATGTAAGGTTCGCACATCAACCAAAATTAAGCATTATTTACCTGAAATGGTTGTTTCA
TCTTATAACCACGATGGGCAAACGCCATGGACAGAATTACAAGCTCTCAATCCTGGTGTAAAAGGTGGAGAATACCGTTC
TCCACAACGCCAATACTCTCAACTCACTTTCAAAAATGCGGATGCGTTTGGACACCCACAAGGAGCTATCGGTCAATTAT
TAGGAAATACGGGGTACTATTGTAAAACTCAAACTACGCCATTTATGCCTTACTTTTTGAGTGGGCTGGATTTTTTTGCC
TGGCGTGAAAATATGCCGGAAATGTTTTACCCGGAAGCTCTGACTCCGGGAATGCGGGAAGTTGGCCGTGTAGGCGATAG
CTGGGGAAATATTTACCCACGTTCCGGTTGGGTAACCCAAGCACACGATTATAAAGCCTCTGCGACCATTGTGCAGAGAG
TGGCAGACATTGTGAGCCGAACAGCTCAGCCACACATTTATTTCCCAGCAGCCAAAACAGGTGGTGCAGGAGAATGGCCT
CCAGGACCGGTCGAAGAGGGACAAGCAAGAACACATAAATGGCAAATACTTTACCCTCAAATGTCAAATACCTGCTCTGT
TTTTCCTAATGGAGGGCAAACAGATACCTATTCTTCTCAAATTTCAAATCAAGGTGATTATGCTTGGGCATTATGGCGAC
CTTATAGTTGTTGCAAACGCCGTGGGCAAACATTCCTTTACAGTATTGATTGGTCACACTAA

Protein sequence :
MKKTFLTILISASLAVPTTLYPQPARASLNTASIAASSASTSCLEYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVS
SYNHDGQTPWTELQALNPGVKGGEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGNTGYYCKTQTTPFMPYFLSGLDFFA
WRENMPEMFYPEALTPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIVSRTAQPHIYFPAAKTGGAGEWP
PGPVEEGQARTHKWQILYPQMSNTCSVFPNGGQTDTYSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-137 100
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-65 51
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 4e-66 51
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-68 51
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 2e-64 50
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-64 50
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-64 49
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 6e-63 47
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 2e-65 46
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 2e-65 46
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 1e-62 46
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 2e-59 46
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 3e-49 44
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 2e-51 43