Gene Information

Name : HSM_0162 (HSM_0162)
Accession : YP_001783515.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Unknown
Product : nucleoside transporter
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 174119 - 175378 bp
Length : 1260 bp
Strand : -
Note : TIGRFAM: nucleoside transporter; PFAM: Na dependent nucleoside transporter; nucleoside recognition domain protein; Na dependent nucleoside transporter domain protein; KEGG: hso:HS_0289 transporter permease

DNA sequence :
ATGAGTTCTCTGATTAGCATTATCGGTATCTTCGCTTTATTATTAATAGCCTTTCTTTTATCTAATAATCGTAAGGCGAT
TAATTATCGTACAGTGCTAGGTGCACTATTAATTCAATTTTTATTTGGTGCATTTATTCTTTATGTTCCCGTTGGTCGTC
AGGCACTACAAAGCGTTGCAGGAGCAGTACAATCAGTCATCAATTATGGTAATGAAGGGATCCGTTTTCTATTTAATGGG
TTAGCGCCACAAGCCGATGGTTCTATGGGCTCAGCCGGTTTTGTTTTCGTTATCAACGTCCTTCCAAATATTGTTTTCTT
CTCCGCATTAATCTCCCTACTTTACTATATCGGTGTAATGCAATGGCTGATTAAAATCATCGGCGGAGCATTACAAAAAG
CATTAGGCACATCAAAATCCGAGTCTATGTCGGCAGCAGCCAATATCTTCGTGGGACAAACAGAAGCCCCCTTAGTCATT
AAACCTTATATTAGCAAAATGACAGAATCAGAGCTGTTTGCAGTAATGTGCGGTGGTTTAGCCTCTATCGCTGGTTCAGT
CATGGCTGGATATGCCGGAATGGGTGTGCCTCTAACCTATCTAATCGCAGCTTCATTTATGGCTGCTCCAGCCGGATTGT
TATTTGCTAAAATTCTTATCCCACAAACTGAAAAATTTAATGATAATTTCGAACAAATACAACAAGAAAAACCAACAAAT
ATTCTTGATGCAGCCGCCGGAGGTGCATCATCTGGTATGCAACTTGCCTTAAATGTGGGTGCGATGTTGATCGCATTTGT
GGCTTTAATTGCATTACTTAACGGAATTCTTGGCACTATCGGAAACTGGATTGGTCAAGAAGGACTTTCTCTTGGCATGA
TCTTTGGTTGGGTTTTCAAGCCGTTAGCCTTCATTATTGGGGTTCCTTGGGAAGAAGCGGAAATTGCTGGTCGTATGATT
GGAACCAAATTAGCAATTAATGAATTTGTTGGTTATTTAGATTTTGTACCATACCTTGCAGCTGATGCAGCGGTGCAACT
AAGTGATAAAACTAAAGCAATTATTACTTTTGCCCTCTGTGGATTTGCAAACTTTAGCTCTATTGCAATTTTAATCGGTG
GCTTAGGGGCAATGGCACCAAATCGTCGTGGTGATATTGCTCGCTTAGGTATTAAAGCGGTAATTGCCGGTTCATTAGCA
AACTTAATGAGTGCAACAATTGCAGGTCTATTTATTGGATTAAGCGGTGCTGCACTGTAA

Protein sequence :
MSSLISIIGIFALLLIAFLLSNNRKAINYRTVLGALLIQFLFGAFILYVPVGRQALQSVAGAVQSVINYGNEGIRFLFNG
LAPQADGSMGSAGFVFVINVLPNIVFFSALISLLYYIGVMQWLIKIIGGALQKALGTSKSESMSAAANIFVGQTEAPLVI
KPYISKMTESELFAVMCGGLASIAGSVMAGYAGMGVPLTYLIAASFMAAPAGLLFAKILIPQTEKFNDNFEQIQQEKPTN
ILDAAAGGASSGMQLALNVGAMLIAFVALIALLNGILGTIGNWIGQEGLSLGMIFGWVFKPLAFIIGVPWEEAEIAGRMI
GTKLAINEFVGYLDFVPYLAADAAVQLSDKTKAIITFALCGFANFSSIAILIGGLGAMAPNRRGDIARLGIKAVIAGSLA
NLMSATIAGLFIGLSGAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 1e-76 49