Gene Information

Name : potB (HSM_1575)
Accession : YP_001784895.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Unknown
Product : spermidine/putrescine ABC transporter membrane protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 1822887 - 1823747 bp
Length : 861 bp
Strand : +
Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component

DNA sequence :
ATGAAGATGAACAGTAATAAATTTCAAAACTTAACTGTTAGTGTCATTTTCGGCTGGTTACTCTTCTTTGTTTTAGTACC
AAACCTGCTAGTCTTAACAGTTAGTTTTTTATCAAAAGATAGCAGTAATTTTTATGCTTTGCCTTTTAGCTTGGAAAGTT
ACGCAAACTTAGTTGACTCACATTACGCCAAAGTAATGTGGAATTCACTCCGTATGTCTGCGATTGCAACTGTTATCTGT
TTACTTGTAGGTTATCCTTTTGCATTTTTCATTGCCAAAATAAAACCCTCATACCGTCCATTTTTGCTATTCCTCGTTGT
TTTACCTTTTTGGACGAATTCGTTAATTCGTATTTACGGAATGAAAATCTTTCTTGGTATGAAAGGTATTTTAAACAATA
CCCTAATTGCAATCGGTATTATTGACACACCAATTCGTATCTTGAATACCGAAACTGCGGTAATCATTGGATTAGTTTAC
ATCTTACTGCCTTTTATGATTTTACCGCTTTACGCTGCCATTGAAAAACTGGATCTTCGTTTATTGGAAGCTGCAAAGGA
TTTGGGAGCAAATTCATTTCAACGTTTTATTAGAATCATTATTCCATTAACAATGCCGGGAATTATCGCAGGTTGTTTGT
TAGTTCTATTACCCGCAATGGGAATGTTCTATGTGTCAGATTTGCTTGGCGGTGCGAAAGCAGCCCTAGTAGGTAATGAA
ATTTATGTCCAATTCTTAAAAATAAGAAACTGGCCTATGGGTTCAGCAATTAGTATAGCACTTACTCTACTAATGGCTTT
ATTAATTTTTATTTACTATAAAACAAGTAAATTATTAAATAAAAAAATGGAGTTGGAATAA

Protein sequence :
MKMNSNKFQNLTVSVIFGWLLFFVLVPNLLVLTVSFLSKDSSNFYALPFSLESYANLVDSHYAKVMWNSLRMSAIATVIC
LLVGYPFAFFIAKIKPSYRPFLLFLVVLPFWTNSLIRIYGMKIFLGMKGILNNTLIAIGIIDTPIRILNTETAVIIGLVY
ILLPFMILPLYAAIEKLDLRLLEAAKDLGANSFQRFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLGGAKAALVGNE
IYVQFLKIRNWPMGSAISIALTLLMALLIFIYYKTSKLLNKKMELE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 4e-70 62