Gene Information

Name : HSM_1379 (HSM_1379)
Accession : YP_001784699.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 1574662 - 1575252 bp
Length : 591 bp
Strand : +
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: hso:HS_0901 two component response regulator

DNA sequence :
ATGAATATTCATCTACTTGATGATGACTTAACAATACTTGATGCCGCTAGTTTTTTATTGGAGCAAGCAGGTTATCAAGT
TAAAACTTGGTCTAATAGTCAGCAATTTGTACAACAAGCTAATATTTTTGAACCTGGAATTTTGTTATTGGATATGAAAA
TGCCTCATTTAGATGGAAAAGCTGTTCATCAATTTTTACAGCAACAAAATAGCCCTTTTGCTGTAATTATTATGACAGGT
CATGGCGATATCCAAATGGCAGTACAAGAACTCAAATTAGGTGCAGTAGATTTTTTACAAAAACCTATGCAATTTAGCCA
ATTACAATCAGCCATTAAACTGGCGAGAAAAAAAACAATGGAGAATTATGAACAATATCAAATCAAACGATGTTATAAGC
AACTTAGCACTAAAGAATTAGAAGTTTTATCTTTATTATTAAAAGGTTATATTAATCGACAAATTGCAGAAACTCTAAAT
ATATCCGTCAGAACAGTTGAAGTACATCGTTCACATATTATGGAAAAAATGCAAGCACAAACAGTGGCGGAATTAATCTA
CAAGATCACTCTTATTAAAAAGGACGAATAA

Protein sequence :
MNIHLLDDDLTILDAASFLLEQAGYQVKTWSNSQQFVQQANIFEPGILLLDMKMPHLDGKAVHQFLQQQNSPFAVIIMTG
HGDIQMAVQELKLGAVDFLQKPMQFSQLQSAIKLARKKTMENYEQYQIKRCYKQLSTKELEVLSLLLKGYINRQIAETLN
ISVRTVEVHRSHIMEKMQAQTVAELIYKITLIKKDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 5e-43 52
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 5e-43 52
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 5e-43 52
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 3e-43 52
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 4e-43 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HSM_1379 YP_001784699.1 response regulator receiver protein VFG0488 Protein 1e-43 52