Name : sgbE (HSM_1240) Accession : YP_001784564.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 1399064 - 1399759 bp Length : 696 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTTAGAACAATTAAAGCAAAAAGTATTTGAAGCAAATTTAGCGTTACCTAAATATCATTTAGTGACATTTACTTGGGG TAATGTAAGCGGTATTGATCGTGAAAAAAATCTAGTCGTGATTAAACCTTCCGGAGTGGAATATGAGGTAATGACGCCTG AAGATATGGTAGTTGTGGATTTATTCACAGGTCGAGTAGTGGAGGGCAATAAAAAGCCTTCATCTGATACTGCTACCCAT CTAATACTTTACCGTGAATTTCCAACACTTGGTGGTATCGTTCATACTCATTCTCGTCATGCTACTATATGGGCACAAGC TGGGGAAGATTTGATTGCTGCAGGCACAACCCACGCAGATTATTTTTATGGTGCTATTCCTTGTACACGCAAAATGACAC CTGTAGAAATTCAGGGTGACTATGAACTTGAAACAGGGAAGGTAATTGTAGAAACATTTCGTGTACGAGGGATTGATCCT AAAGATGTGCCTGCGGTATTAGTTCATTCACATGGTCCTTTTGCATGGGGAAATGATCCGGATAATGCCGTACACAATGC TGTTGTTTTAGAAGAGATTGGCTATATGAATTTATTTAGTCGCCAACTTCGTCCTAATTTATCGTCGATGCAACAAGAGT TGCTGGATAAGCATTACTTACGTAAACATGGTAAGAATGCTTATTACGGACAGTAA Protein sequence : MLEQLKQKVFEANLALPKYHLVTFTWGNVSGIDREKNLVVIKPSGVEYEVMTPEDMVVVDLFTGRVVEGNKKPSSDTATH LILYREFPTLGGIVHTHSRHATIWAQAGEDLIAAGTTHADYFYGAIPCTRKMTPVEIQGDYELETGKVIVETFRVRGIDP KDVPAVLVHSHGPFAWGNDPDNAVHNAVVLEEIGYMNLFSRQLRPNLSSMQQELLDKHYLRKHGKNAYYGQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 6e-62 | 56 |