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Name : HSM_1166 (HSM_1166) Accession : YP_001784496.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Unknown Product : phage capsid scaffolding Function : - COG functional category : - COG ID : - EC number : - Position : 1328653 - 1329477 bp Length : 825 bp Strand : - Note : PFAM: phage capsid scaffolding; KEGG: hit:NTHI1887 predicted capsid scaffolding protein DNA sequence : ATGAAAAAATACAAATCAAAATGGTTTGTTGTTGCAACCGAGGGGGCGACCACAGACGGACGTAATATTTCACGAGTTTG GATTGAACAAATGGCAGAAAGCTATAATCCTAAAACCTATGGAGCACGTATTAATATAGATCACATCAAATCTTATCTTT ACCGAGAAGAAGAACCGCACGCTCAAGCTTACGGTGATGTCATCGCCTTAAAAACCCAAGAAAGCGAAGGAAAATTACAA CTCTTAGCACAAATTGACCCCACAGAAGAACTCATTGCGTTAAACAAAAAACGTCAAAAAGTGTATACCTCAATTGAAAT CGATATCAATTTCAGCGACACAGGAAAAGCCTATTTAGTAGGTCTTGCAGTCACGGATAACCCGGCAAGTTTAGGGACGG AAATGTTACAGTTTGCAGCAACAGCAAAAGCCAATCCGTTTAATGCTCGCAAATTAAAAACAGAAAATTTGTTTACTGAA GCCGTAGAAGTCTGCTTAGAATTTAACGACGTGGAGCCGGAAAAACCTACTCTCTTTGAACGCATTACAGCGATGTTTAG CCAAAAAGAGCGGACAGATAAACAACGTTTTAACGATATAGATCAAGCGGTCATGTTACTTTCAAAAGAAGTACAACATC TCCATCAAAAAACCACCGCACTTGAAACGGAAAATCAAACGCTAAAACAAACGCTAAATGAATACACAGAAAAAACAAAC GAACACAGCGAAAAATTCGCCGTGTTAGAAAAAAAACCGCATACCAACTATACCGAACGCCCTTTAATTAGTGGCGATAG TATGAATGATGGACGTTTCTTTTAA Protein sequence : MKKYKSKWFVVATEGATTDGRNISRVWIEQMAESYNPKTYGARINIDHIKSYLYREEEPHAQAYGDVIALKTQESEGKLQ LLAQIDPTEELIALNKKRQKVYTSIEIDINFSDTGKAYLVGLAVTDNPASLGTEMLQFAATAKANPFNARKLKTENLFTE AVEVCLEFNDVEPEKPTLFERITAMFSQKERTDKQRFNDIDQAVMLLSKEVQHLHQKTTALETENQTLKQTLNEYTEKTN EHSEKFAVLEKKPHTNYTERPLISGDSMNDGRFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4626 | NP_458708.1 | putative capsid protein | Not tested | SPI-7 | Protein | 3e-52 | 46 |
| t4320 | NP_807915.1 | capsid protein | Not tested | SPI-7 | Protein | 3e-52 | 46 |
| unnamed | ABR13465.1 | putative capsid scaffold | Not tested | PAGI-6 | Protein | 4e-48 | 44 |
