|
Name : HSM_1160 (HSM_1160) Accession : YP_001784490.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Unknown Product : glycoside hydrolase family protein Function : - COG functional category : R : General function prediction only COG ID : COG3772 EC number : - Position : 1325327 - 1325863 bp Length : 537 bp Strand : - Note : PFAM: glycoside hydrolase family 24; KEGG: hso:HS_1388 lysozyme, phage-related lysozyme DNA sequence : ATGAATAAATTCACAAAATGGGGGACAGGGGCTATTTGTAGCGTAGTTGCCATTATTGCCCTTGTCAAAACAAACCATCA AGAGTTACGCATAAGTCAACAAGGCTTAGACCTTATAGGAAATGTAGAAGGTTGCAGAAGAGACCCCTATCACTGCCCCG CCGACGTCTTAACGGTGGGCATAGGCTCCACGGAAGCAAACGGAAAAAACATTGACCCCAAAAAACGTTATAGCGACAAA GAAATAGCCCAACGATGGGCATATGATTTACGCCTGGCGGAACAATGCGTAAACCGCTATGGAAACGGCAAAAATCTACC GCAAGGGGCGTTTGATGCCTTTGTTTCCATTACCTTTAATGTAGGATGTGGAAAAATGCAAAAAAGCACCTTATTTAAAC AAGCAAACCAAGGCTTTACCCCTCAACTCTGTCACCAGTTTGAACGCTGGATTTACGCAGGCGGAAAAAAATTAAACGGC TTAGTAGCACGCAGAGCAAAAGAAAAAGCCTTCTGTTTAGGTGAATACCATGATTAA Protein sequence : MNKFTKWGTGAICSVVAIIALVKTNHQELRISQQGLDLIGNVEGCRRDPYHCPADVLTVGIGSTEANGKNIDPKKRYSDK EIAQRWAYDLRLAEQCVNRYGNGKNLPQGAFDAFVSITFNVGCGKMQKSTLFKQANQGFTPQLCHQFERWIYAGGKKLNG LVARRAKEKAFCLGEYHD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nucD2 | NP_458702.1 | putative lysozyme | Not tested | SPI-7 | Protein | 3e-17 | 41 |
| nucD | NP_807909.1 | lysozyme | Not tested | SPI-7 | Protein | 3e-17 | 41 |
