Gene Information

Name : HSM_1151 (HSM_1151)
Accession : YP_001784481.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Unknown
Product : baseplate J family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 1317481 - 1318395 bp
Length : 915 bp
Strand : -
Note : PFAM: Baseplate J family protein; KEGG: hit:NTHI1860 predicted phage-related baseplate assembly protein

DNA sequence :
ATGAGCGAATTAGTTAATTTATCGAAATTAGACGCCCCAAAGGTATTAGAACACCTTGATTTTGAACAGTTATTAAAACA
ACGCAAAGCTCAATTTATAGCACTCTACCCTAAAGAAAAACAAGCCTATTGGGAAACCGTACTCGCATTAGAAAGTGAAC
CGATTAACAAATTATTACAAGAAAATTGTTATTTGCAGTTATTAGAACGCAAACGCATTAACGAAGCAGCAAAAGCAACA
ATGTTAGCTTATGCAACAGGGAGCGATCTTGATGTGATAGCAGCTAATTTTAATGTACAGCGTCTCATCATACAAAAAGC
GGACTATAGCGTAAATCCGCCAATAGAAGAAAAACGAGAAAGCGACACAGATTTACGTTTGCGTTGCCAATTAGCGTTTG
AGGGGTTGTCTGTGGCGGGACCTCGTGCAGCTTATGTATTCCATGCGTTATCCGCACATGCGGAGGTTGCTGATGTCTCT
GTGATATCGCCCTCACCTGCGAATGTGACTGTCACTATTTTAGCCAAAAAAGGGGACGGGCAAGCCAGTGAGGCGGTTTT
AAATGCGGTGACCAAAAAACTGAATGATGAAAATATCCGCCCAATAGCGGATAGAGTAACGGTACAAAGTGCCAGTATTC
ATCGGTATCAAATTCATGCAAAACTGCACATCTACAGAGGACCGGAATACGAACCCATCAACAAACAGGCACAGGAAAAA
ATCAAAAAATACACCGAAGACAAACAACGATTAGGACGAGATATTACCTTATCCGGTATTTATGCGTCCTTGCATATTGA
AGGGGTGCAACGTGTAGAATTACTACAACCTCAAGCCGATATTGTATTACAGAATAATCAAGCCGGCTTTTGTGAAAAAA
TTACACTTGAATTGGTGACAGCAGATGATTATTGA

Protein sequence :
MSELVNLSKLDAPKVLEHLDFEQLLKQRKAQFIALYPKEKQAYWETVLALESEPINKLLQENCYLQLLERKRINEAAKAT
MLAYATGSDLDVIAANFNVQRLIIQKADYSVNPPIEEKRESDTDLRLRCQLAFEGLSVAGPRAAYVFHALSAHAEVADVS
VISPSPANVTVTILAKKGDGQASEAVLNAVTKKLNDENIRPIADRVTVQSASIHRYQIHAKLHIYRGPEYEPINKQAQEK
IKKYTEDKQRLGRDITLSGIYASLHIEGVQRVELLQPQADIVLQNNQAGFCEKITLELVTADDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 5e-67 52
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 5e-67 52
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 4e-52 49