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Name : HSM_1112 (HSM_1112) Accession : YP_001784442.1 Strain : Haemophilus somnus 2336 Genome accession: NC_010519 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctP Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1638 EC number : - Position : 1273654 - 1274640 bp Length : 987 bp Strand : + Note : TIGRFAM: TRAP dicarboxylate transporter DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: hso:HS_0701 TRAP dicarboxylate transporter periplasmic component DNA sequence : ATGAAATTTGAAAAACTCGCTCTTGCAACTTTAGCGTTGAGTATGTCTGCCTCTGTTTTTGCAGCAGATTATGAGCTGAA ATTCGGTATGGTTGCAGGTACCAGTTCCAATGAGTACAAAGCGGTTGAATTTTTTGCGAAAGAAGTAAAAGAAAAGTCCG ATGGTAAAATTGAAATTGCAATTTTCCCAAGTGCACAACTTGGTGATGACCGTACAATGTTAAAACAACTTAAAGACGGT TCTTTAGATTTTACATTAGGTGAAACTGCCCGTTTTCAAATCTTCTTCCCTGAAGCGGAAGTGTTCGCATTGCCTTATAT GCTTCCAAACTTTGAAATCAGTAAAAAAGCATTACTTGAAACCAACTTCGGTAAGGGGTTGGTCCAAAAAATTAATAAAG AGTTAAATCTTGAGTTATTGTCTGTAGCTTACAACGGTACTCGCCAAACTACATCTAATCGTGCAATCAACAGCATTGCA GATATGAAAGGCTTAAAATTACGTGTACCGAATGCGGCAACTAATTTAGCTTTTGCAAAATATGTAGGTGCTTCTCCGAC ACCAATGGCATTCTCGGAAGTGTATTTGGCGTTACAAACCAATGCTGTAGACGGTCAGGAAAACCCATTACCAACTGTCC AAGCACAGAAATTCTATGAAGTGCAAAAATATTTAGCTTTGACTAACCACATCTTAAACGATCAGCTTTACTTGGCAAGT CGTGAAACTTTAGAGGATTTACCGGAAGATTTGCAAAAAGTAGTTAAAGAGGCAGCTGAGAACGCAGCAGAGTATCACAC TAAATTGTTCAAAGAGGGTGAAAAAAATTTAGTTGCGTTTTTCAAAGAGAAAGGTGTTACTGTAACTACTCCGGATGTAA AACCGTTCCGTGATGCGTTAAAACCTTACTATGATGAATACTTAAATAAAAATGGTGCGTTAGGGAAACAGGCAATCGAA GAAATTTCAACTCTCATTAAAAAATAA Protein sequence : MKFEKLALATLALSMSASVFAADYELKFGMVAGTSSNEYKAVEFFAKEVKEKSDGKIEIAIFPSAQLGDDRTMLKQLKDG SLDFTLGETARFQIFFPEAEVFALPYMLPNFEISKKALLETNFGKGLVQKINKELNLELLSVAYNGTRQTTSNRAINSIA DMKGLKLRVPNAATNLAFAKYVGASPTPMAFSEVYLALQTNAVDGQENPLPTVQAQKFYEVQKYLALTNHILNDQLYLAS RETLEDLPEDLQKVVKEAAENAAEYHTKLFKEGEKNLVAFFKEKGVTVTTPDVKPFRDALKPYYDEYLNKNGALGKQAIE EISTLIKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1779 | NP_231414.1 | C4-dicarboxylate-binding protein | Not tested | VPI-2 | Protein | 5e-63 | 48 |
| dctP-1 | YP_001217320.1 | C4-dicarboxylate-binding periplasmic protein | Not tested | VPI-2 | Protein | 5e-63 | 48 |
| VPI2_0027c | ACA01844.1 | C4-dicarboxylate-binding periplasmic protein | Not tested | VPI-2 | Protein | 3e-63 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HSM_1112 | YP_001784442.1 | TRAP dicarboxylate transporter subunit DctP | VFG1112 | Protein | 2e-63 | 48 |
