Gene Information

Name : HSM_0970 (HSM_0970)
Accession : YP_001784302.1
Strain : Haemophilus somnus 2336
Genome accession: NC_010519
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 1110139 - 1111353 bp
Length : 1215 bp
Strand : +
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGCGAGTTTTCCCTAAATCCGATAAGTTAGAACATGTATGCTACGATATTCGTGGACCGGTACATCAAGAGGCGTTACG
TTTGGAAGAAGAAGGCAAAAAGATCTTAAAATTAAATATTGGTAATCCAGCACCATTCGGTTTTGAAGCTCCTGATGAGA
TTTTGGTAGATATTTTGCGTAATTTGCCTGCCGCACAAGGATATTGTGATTCAAAAGGTCTATATTCTGCACGTAAAGCT
ATTGTTCAATATTACCAATCTAAGAATATTTTAAGTGCGACCGTAAATGATGTATACATCGGTAATGGTGTTTCTGAACT
TATTACTATGTCATTACAAGCATTGTTGAATGATGGTGATGAGGTGTTAATCCCAATGCCTGATTACCCATTATGGACGG
CTGCTGCAACATTAGCCGGCGGAAAAGCGGTTCATTATTTATGTGATGAACAAGCTGATTGGTTTCCTGATGTGGCAGAT
ATAAAAAGTAAGGTTACTTCTCGCACAAAAGCCATTGTTATTATTAATCCTAATAATCCAACGGGAGCTGTTTATAGTAA
AGAATTATTATTAGATATAGTTGAAGTAGCTCGCCAAAATGGATTGATGATTTTCGCCGATGAAATTTACGATAAAATTT
TATATGACAACGCTGTTCATCATCATATCGCCGCATTAGCACCAGATTTGTTAACGGTTACTTTCAACGGCTTATCAAAA
TCTTATCGTGTAGCAGGATTTCGCCAAGGCTGGATGATTTTAAATGGACCGAAACAGCAAGCGAAAGGCTATATTGAAGG
TCTAGATATGTTGGCCTCGATGCGTTTATGTGCCAATCATCCTATGCAACATGCTATACAAACAGCTTTGGGTGGGTATC
AAAGTATCAATGAATTTATTTTGCCGGGTGGGCGTTTATTGGAACAGCGGAACAAGGCTTATGAGTTGATTAACCAAATT
CCGGGGTTAAGTTGTACAAAGCCAATGGGAGCACTTTATATGTTTCCGAAAATTGATACTAAAAAATTCAATATCTATGA
TGATGAAAAAATGGTATTGGATTTATTGCGTCAAGAGAAAGTGTTATTAGTTCATGGACGTGGTTTTAACTGGCAACAAC
CGGATCATTTTAGAATTGTAACCTTGCCTTATGTGAATCAAATTGAAGACGCCTTAGGAAGATTAGCCAAATTTTTAACG
CATTATCGTCAGTAG

Protein sequence :
MRVFPKSDKLEHVCYDIRGPVHQEALRLEEEGKKILKLNIGNPAPFGFEAPDEILVDILRNLPAAQGYCDSKGLYSARKA
IVQYYQSKNILSATVNDVYIGNGVSELITMSLQALLNDGDEVLIPMPDYPLWTAAATLAGGKAVHYLCDEQADWFPDVAD
IKSKVTSRTKAIVIINPNNPTGAVYSKELLLDIVEVARQNGLMIFADEIYDKILYDNAVHHHIAALAPDLLTVTFNGLSK
SYRVAGFRQGWMILNGPKQQAKGYIEGLDMLASMRLCANHPMQHAIQTALGGYQSINEFILPGGRLLEQRNKAYELINQI
PGLSCTKPMGALYMFPKIDTKKFNIYDDEKMVLDLLRQEKVLLVHGRGFNWQQPDHFRIVTLPYVNQIEDALGRLAKFLT
HYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-127 64
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-127 64
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 1e-127 64
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-127 64