Gene Information

Name : CLD_0113 (CLD_0113)
Accession : YP_001780282.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 769200 - 769925 bp
Length : 726 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGAAGCATCAGTTGTAGTAAGTGATGTAAGCAAAAGTTTTGGCAAAAAATTAGTATTAAATAATATAAATTTAAATAT
AAATAAGGGTCAAATTTATGGACTAATAGGGCCATCTGGATCGGGAAAAACAACTTTAGTAAAAATGATAGTGGGAATGG
AGGCTCCTGATAAAGGAACAATTAAGGTTCTAAATAAAAATGTTCCTAATTTAAAATTATTGCAAAACATAGGATATATG
GCTCAATCAGACGCACTTTATACTGAGTTAACGGCACAAGAAAATCTTAAATTTTATGCTTCTTTATTTAAATTAAATAA
AAGAGCTATGAAAAATCGTATTTCTTATGTGGTAAATATGGTGAATTTGAACAATGATTTATCCAAAAAAGTTTCTACTT
ACTCTGGTGGAATGAAACGTAGATTATCTCTTGCTATAGCTTTAATTCAAAACCCAGAAATACTTATATTAGATGAACCT
ACTGTAGGAATTGATCCTGAATTAAGACTAAATATTTGGAATGAATTACTACGCTTAAAAAATGAAGAAAATAAAACAAT
TATAGTTACAACACATGTTATGGATGAAGCTAAAAAATGTGATTTTCTTGCAATGGTTAGAGATGGTGTTATATTGGCAG
ATGGTACTCCATCCGAGTTGATGGAATATTACAAAGCTAATGATTTAGATGAAGTATTTTTAAAAGCAGGGAGAAAAAAG
ATATGA

Protein sequence :
MEASVVVSDVSKSFGKKLVLNNINLNINKGQIYGLIGPSGSGKTTLVKMIVGMEAPDKGTIKVLNKNVPNLKLLQNIGYM
AQSDALYTELTAQENLKFYASLFKLNKRAMKNRISYVVNMVNLNNDLSKKVSTYSGGMKRRLSLAIALIQNPEILILDEP
TVGIDPELRLNIWNELLRLKNEENKTIIVTTHVMDEAKKCDFLAMVRDGVILADGTPSELMEYYKANDLDEVFLKAGRKK
I

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 4e-48 53
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 7e-46 49
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-17 42
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-17 42
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-17 42
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-17 42