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Name : clpB (CLD_0341) Accession : YP_001780063.1 Strain : Clostridium botulinum Okra Genome accession: NC_010516 Putative virulence/resistance : Virulence Product : clpB protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 511040 - 513640 bp Length : 2601 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 DNA sequence : ATGAATATTGAAAAATTAACTTTAAAGGTACAGCAAGCTATAAATGATTCTCAACTTGTTGCAGTTAAGTATAATCATCA GCAGATTGATACTATACATTTATTTTCAGCCTTAATTTCTCAAGATGATGGATTAATTCCTAATATTTTAGGGAAAATGG GAGTGAATATAAGAGATATTAATGCTGAGACCAATAGGGTCTTAGATAATATGCCTAAAGTACTAGGTGAGGGAGCACAG TCTTCTTCTGTGTACCCTACTAGAAGATTTGAAGAGGTTTTTGTAAAGGCAGAACAGATAGCAAAGGATTTTAAAGATTC ATATATAAGTGTAGAACATGTTTTATTAGCAATAATGGATGTGGATAGAAATACTGTTCTTCCTATATTAGAAAAATTTG GAGTAAAAAAATCAGAGTTTTTAAAAGCTTTATCAGCTGTTAGAGGAAGTCAAAGGGTTGATAATCAAGATCCAGAGGGG ACTTATGAAGCTTTAGTGAAATATGGAAGAAACTTAGTAGAAGAAGCTAAAAAGCATAAGCTGGATCCTGTTATAGGAAG AGATGAAGAAATAAGAAGAGTTGTAAGAATTTTATCTAGAAGAACTAAGAATAATCCTGTACTTATTGGAGAACCAGGTG TAGGTAAAACTGCTATTGTAGAAGGATTGGCAGAGAGAATTGTCAGAGGAGATGTACCAGAAAGTTTAAAAAATAAAATA ATATTTTCTCTAGATATGGGAGCACTTATTGCAGGTGCAAAATACAGAGGAGAATTTGAAGAAAGACTAAAAGCAGTATT AAAAGAAGTTCAAAATAGTGAAGGAAGAATAATTTTATTTATAGATGAAATTCATACTATAGTAGGGGCAGGAAAAACAG AGGGTTCTATGGATGCAGGAAATTTAATAAAACCTATGCTTGCCAGAGGAGAACTTCATTGTATTGGAGCTACTACCTTT GATGAATATAGACAGTATATAGAAAAAGACAAAGCTTTAGAAAGAAGATTTCAACCTGTAATAACAGATGAGCCTACAGT AGAGGATACGGTATCTATATTAAGAGGGCTTAAAGAAAGATTTGAAATATATCATGGAATAAGAATACATGATTCAGCTA TTGTAGCTGCAGCTAAGCTCTCTAGTAGATATATTACAGATAGATATCTCCCGGACAAGGCAATAGATTTAATAGATGAA GCTTGTGCTATGATAAGAACAGATATAGATAGTATGCCAACGGAAATGGATTCAATGAAAAGAAAAATATTTCAATTAGA AATAGAAAAGGAAGCATTGTCTAAAGAAAAAGATGTGGCTTCAAAGGAAAGATTAGAAGTTTTAGAAAAGGAATTGAGTG AACTAAAAGAGAAAGATAAAGAAATGACAGCCAAGTATGAAAATGAAAAATCTCATATAACAAAAATAAGAGATTTAAAA GAAAAATTGGATGATGTTAGAGGTCAGATGGAAAAAGCCGAAAGAGAATATGATTTGAATAAAGTTGCAGAATTAAAATA TGGTTTAATACCAGCTCTTCAAAGAGAAATAGAAGAAAAAGAGAAATTAATAAAGGAAAATAGTAACGGAAATGCTATGT TAAAAGAAGAGGTTACAGAGCAAGAAATTTCTGAAATAATCTCTAAATGGACTGGTATACCTGTAACAAGATTAGTTGAA ACTGAAAGACAAAAACTATTACAATTAGGAGATCAATTAGAAACTAGAGTAATAGGTCAAGGAGAGGCAGTAAAAGCAGT AACTAATGCAGTTATAAGAGCTAGAGCAGGACTAAAAGATCCAAGAAAACCTATAGGATCATTTATATTCTTAGGACCTA CAGGTGTAGGAAAGACAGAACTTGCAAAAACTTTGGCCAGAACTTTATTTGATACTGAAGAAAATATTATAAGAATAGAT ATGTCTGAATATATGGAAAAATATTCAGTATCAAGACTTATAGGAGCTCCTCCAGGATATGTAGGATATGAAGAAGGAGG CCAGCTAACAGAAGCCGTTAGGAGAAAGCCTTATAGTGTTATATTATTTGATGAAATAGAAAAAGCTCATGACGATGTAT TTAACATATTCCTTCAAATATTAGATGATGGAAGACTTACGGACAATAAAGGGAAGGTTATAGATTTTAAAAATACTATA ATTATAATGACTTCTAATTTGGGAAGTAACTATTTATTAGATAATGAAAGCAAAGAAGGCATAGATGAAAGTATAAGAAC AAGAGTAAAAGAGGCTTTAAAGGCTAGATTTAAACCAGAATTTTTAAATAGAGTAGATGACATTATAATGTTTAAACCTC TTACAGTAGAAGACATCAAGAGAATAATAGATATATTCTTAGATGATATAAGAAAAAGACTTAAAGATAAGAATATACAG CTTAAAATTACTGATAGTGCAAAAGATATAATGGCCAAAGAAGGTTATGATCCAATATATGGCGCAAGGCCGCTAAAGAG ATATATAGAAGATACTATAGAAACAGAAATAGCAAAACAAATAATAGCAGGTAATATATATGAAGGTACTACTGTAGGAG TAGACTTAAAAGGAGAGTCAATAGTTATAGAAAGAATATAA Protein sequence : MNIEKLTLKVQQAINDSQLVAVKYNHQQIDTIHLFSALISQDDGLIPNILGKMGVNIRDINAETNRVLDNMPKVLGEGAQ SSSVYPTRRFEEVFVKAEQIAKDFKDSYISVEHVLLAIMDVDRNTVLPILEKFGVKKSEFLKALSAVRGSQRVDNQDPEG TYEALVKYGRNLVEEAKKHKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPESLKNKI IFSLDMGALIAGAKYRGEFEERLKAVLKEVQNSEGRIILFIDEIHTIVGAGKTEGSMDAGNLIKPMLARGELHCIGATTF DEYRQYIEKDKALERRFQPVITDEPTVEDTVSILRGLKERFEIYHGIRIHDSAIVAAAKLSSRYITDRYLPDKAIDLIDE ACAMIRTDIDSMPTEMDSMKRKIFQLEIEKEALSKEKDVASKERLEVLEKELSELKEKDKEMTAKYENEKSHITKIRDLK EKLDDVRGQMEKAEREYDLNKVAELKYGLIPALQREIEEKEKLIKENSNGNAMLKEEVTEQEISEIISKWTGIPVTRLVE TERQKLLQLGDQLETRVIGQGEAVKAVTNAVIRARAGLKDPRKPIGSFIFLGPTGVGKTELAKTLARTLFDTEENIIRID MSEYMEKYSVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHDDVFNIFLQILDDGRLTDNKGKVIDFKNTI IIMTSNLGSNYLLDNESKEGIDESIRTRVKEALKARFKPEFLNRVDDIIMFKPLTVEDIKRIIDIFLDDIRKRLKDKNIQ LKITDSAKDIMAKEGYDPIYGARPLKRYIEDTIETEIAKQIIAGNIYEGTTVGVDLKGESIVIERI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-159 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001780063.1 | clpB protein | VFG2084 | Protein | 4e-103 | 41 |
