Gene Information

Name : CLD_0440 (CLD_0440)
Accession : YP_001779964.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 392813 - 393643 bp
Length : 831 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAAAAGTATTGAAACTAAAAATTTAGATATAGCTTATGAGGATACTCTCATTGTAAAAGAATTAAATATGCAGATACC
AAAGGGTAAGATAACTTCTATTATAGGAGCAAATGGTTGCGGTAAATCAACTATCTTGAAAGCTGTTGGACGTATATTAA
AGCCTAAGAAGGGTGTAGTACATCTAAGTGGACAAGATATAAGTAAATTGTCTACAAAAGAAATAGCTAAAAAGATGGCT
ATACTTCCTCAAAATCCTACTGCACCAAGTGGACTTACTGTAAGTGAGTTAGTTGCATATGGACGCTTCCCTCATCAAAA
AGGTTTTGGAAATCTTACAGAGGAAGATAAAAGAATTGTTAAGTGGGCTTTAGCTGCAACTAAGCTAAGTGAATTTGAGA
GGAGAGAGGTTGATACTTTATCAGGAGGGCAAAGACAGAGGGTTTGGATTGCTATGGCTTTAGCACAGCAAACTGATTTG
ATTTTATTAGATGAACCTACTACTTATCTTGATCTTGCTCACCAATTAGAGGTTTTAAAGCTTTTATATGAGCTTAACCG
TAATCAAAAGTGTACTATTGTTATGGTAATTCATGATTTAAATCTTGCGGCAAGATTCTCTGACTATATTATTGCTATTC
AAAAAGGAGCTATCATAAAATATGGAAATCCTGAGGAAGTTATGACTCCAGAGGTTCTAAGGAAAACCTTCAATATTAAT
GCTGATATTGTTATTGAGCCTAAGAGTAATCGTCCAGTATGTATTACCTATGATATTATAGATGAAAATGAGGGTGTGCA
ATTGAAGGAAAGGGAGGCAGTAGGTATATGA

Protein sequence : 
MKSIETKNLDIAYEDTLIVKELNMQIPKGKITSIIGANGCGKSTILKAVGRILKPKKGVVHLSGQDISKLSTKEIAKKMA
ILPQNPTAPSGLTVSELVAYGRFPHQKGFGNLTEEDKRIVKWALAATKLSEFERREVDTLSGGQRQRVWIAMALAQQTDL
ILLDEPTTYLDLAHQLEVLKLLYELNRNQKCTIVMVIHDLNLAARFSDYIIAIQKGAIIKYGNPEEVMTPEVLRKTFNIN
ADIVIEPKSNRPVCITYDIIDENEGVQLKEREAVGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-52 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-52 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-53 45
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-56 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-56 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-54 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-55 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-55 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-55 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-55 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-57 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLD_0440 YP_001779964.1 iron ABC transporter ATP-binding protein BAC0164 Protein 2e-54 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLD_0440 YP_001779964.1 iron ABC transporter ATP-binding protein VFG1042 Protein 1e-54 44
CLD_0440 YP_001779964.1 iron ABC transporter ATP-binding protein VFG0925 Protein 4e-52 44