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Name : CLD_1171 (CLD_1171) Accession : YP_001782974.1 Strain : Clostridium botulinum Okra Genome accession: NC_010516 Putative virulence/resistance : Resistance Product : DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 3641678 - 3642370 bp Length : 693 bp Strand : - Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : TTGAGTTATAAAATATTAATAGTAGATGATGATAAGACCATAGTAGAATTTTTACAAATATTTTTAATTAAAGAAGGGTA TGAGGTAAGGATTTCTTATAATGGAGAAGAGGCTTTAGATAAAATAAGAAGTGAACAATTTAATTTGATTCTAATGGATA TAATGATGCCTAAATTAGATGGATTTGAAGCTATTAAAAGAATAAGAAAACTTACCAATATTCCTATTATATTTTTAACT GCAAAAGATAGTCAGCAAGATAAAATTAAAGGCTTTATTTCTGGATGTGACGACTACATAACAAAGCCCTTTGATTTAGT AGAGCTTTCTTTAAGAGTGTCCGCTATACTTAAAAGAGTTAGCACAAGTGTAGCTGAAGAAAATAAGGATATTATAAAAG TAAAGGATTTAGAATTAAATTTAAAAGAGCACACATTATATAAAGAAAAAAATGAAATAAAGCTTACTCCAAAGGAATTT GACATTTTATTTTTGCTTGCTAGAAATAAGGGAAGAATTTTTCCTTCAAGTGAGATATATGAAAGGGTATGGGGACAAGA ATTTTTAGAAAATGACAATAGCTTGTTGACCCATATTAGAAATTTAAGAGAAAAGCTAAGTGATACTGTAAAAAACTCAA AATACATTAAAACTGTTTGGGGAGTGGGTTATAAGATTGAAAAGGAAGCTTAG Protein sequence : MSYKILIVDDDKTIVEFLQIFLIKEGYEVRISYNGEEALDKIRSEQFNLILMDIMMPKLDGFEAIKRIRKLTNIPIIFLT AKDSQQDKIKGFISGCDDYITKPFDLVELSLRVSAILKRVSTSVAEENKDIIKVKDLELNLKEHTLYKEKNEIKLTPKEF DILFLLARNKGRIFPSSEIYERVWGQEFLENDNSLLTHIRNLREKLSDTVKNSKYIKTVWGVGYKIEKEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanRB | YP_001698483.1 | regulatory protein | Not tested | Not named | Protein | 2e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_014475.1.orf0.gen | Protein | 3e-44 | 45 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_005054.2598277.p0 | Protein | 3e-44 | 45 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | AF155139.2.orf0.gene | Protein | 3e-46 | 45 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | AM180355.1.gene1830. | Protein | 5e-42 | 44 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | DQ212986.1.gene4.p01 | Protein | 3e-43 | 43 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | FJ349556.1.orf0.gene | Protein | 9e-49 | 43 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | AF162694.1.orf4.gene | Protein | 8e-39 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | EU250284.1.orf4.gene | Protein | 4e-41 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_002952.2859905.p0 | Protein | 5e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_009782.5559369.p0 | Protein | 4e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_002951.3237708.p0 | Protein | 4e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_007622.3794472.p0 | Protein | 6e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_003923.1003749.p0 | Protein | 3e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_002758.1121668.p0 | Protein | 4e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_009641.5332272.p0 | Protein | 4e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_013450.8614421.p0 | Protein | 4e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_007793.3914279.p0 | Protein | 4e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_002745.1124361.p0 | Protein | 4e-38 | 41 |
| CLD_1171 | YP_001782974.1 | DNA-binding response regulator | NC_012469.1.7685629. | Protein | 3e-38 | 41 |
