Gene Information

Name : CLD_2108 (CLD_2108)
Accession : YP_001782072.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Resistance
Product : phosphate regulon DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2655209 - 2655907 bp
Length : 699 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGGCTATGGAAAAAATACTTATAGTAGACGATGAAGAACATATATGTGAATTAATAAAATTTAATTTAGAAAATAATGG
TTATAACTGTATTTGTGCTTTGAATGGGATAGAGGCATTAAATATAGCTAAAGAAGAAAAACCAGATTTAATACTTTTAG
ATCTAATGTTACCGGGAATGGATGGATATGAGGTTTGCAAGGAAATAAGGAAAGATAATAATATAGCTACTACCCCTATA
ATAATGATTACAGCTAAAGGAGAGGAATTGGATAAAGTTTTGGGCTTAGAACTAGGGGCGGATGATTATATAACCAAACC
TTTTTCAGTTAGAGAAATGATAGCTAGAGTAAAAGCGGTACTTAGAAGAAGAACAACCATAAATATAGAATCTAAATCCT
ATATTTTAGGGAATATTGTTGTGGATTTTGAAAAACATTCCCTTACAAAGGCAGGAGAAAAAATAGAACTTACTCTAAAA
GAGTTTGAACTTTTAGAGGTGTTAATAAAGAATAAAGGGAAGGTTATGACAAGAGACTTTTTGTTAGATAGAATATGGGG
ATATGAATACATTGGAGAAACTAGGACTGTAGATGTGCATATAAGGCATTTAAGAAAAAAAATAGAGGATGATGATAAAA
ATCCTAAGTTTATTGAAACTATAAGGGGAATAGGATATAGATTCAATAGTGAATTTTAA

Protein sequence : 
MAMEKILIVDDEEHICELIKFNLENNGYNCICALNGIEALNIAKEEKPDLILLDLMLPGMDGYEVCKEIRKDNNIATTPI
IMITAKGEELDKVLGLELGADDYITKPFSVREMIARVKAVLRRRTTINIESKSYILGNIVVDFEKHSLTKAGEKIELTLK
EFELLEVLIKNKGKVMTRDFLLDRIWGYEYIGETRTVDVHIRHLRKKIEDDDKNPKFIETIRGIGYRFNSEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_001698483.1 regulatory protein Not tested Not named Protein 2e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_012469.1.7686381. Protein 5e-50 52
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator HE999704.1.gene2815. Protein 4e-52 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_012469.1.7685629. Protein 2e-52 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_002952.2859905.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_009782.5559369.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_002951.3237708.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_002758.1121668.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_007622.3794472.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_009641.5332272.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_013450.8614421.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_007793.3914279.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_003923.1003749.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_002745.1124361.p0 Protein 2e-53 50
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator AE016830.1.gene1681. Protein 4e-50 47
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator HE999704.1.gene1202. Protein 1e-37 45
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_010079.5776364.p0 Protein 3e-40 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_002952.2859858.p0 Protein 3e-40 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_007622.3794948.p0 Protein 3e-40 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_003923.1003417.p0 Protein 3e-40 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_013450.8614146.p0 Protein 3e-40 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_002951.3238224.p0 Protein 3e-40 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_007793.3914065.p0 Protein 3e-40 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_002758.1121390.p0 Protein 3e-40 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator FJ349556.1.orf0.gene Protein 4e-43 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator DQ212986.1.gene4.p01 Protein 1e-37 44
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator HE999704.1.gene1528. Protein 8e-38 43
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator AM180355.1.gene1830. Protein 6e-36 43
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator AE000516.2.gene3505. Protein 2e-43 43
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator AE015929.1.gene1106. Protein 2e-35 42
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_014475.1.orf0.gen Protein 8e-38 42
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_005054.2598277.p0 Protein 8e-38 42
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator AF155139.2.orf0.gene Protein 5e-41 42
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator CP004022.1.gene1676. Protein 8e-35 41
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator CP000647.1.gene2531. Protein 1e-36 41
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator CP000034.1.gene2186. Protein 4e-37 41
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator NC_002695.1.916589.p Protein 3e-37 41
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator CP001918.1.gene3444. Protein 8e-36 41
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator BAC0039 Protein 4e-37 41
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator BAC0596 Protein 6e-36 41
CLD_2108 YP_001782072.1 phosphate regulon DNA-binding response regulator CP001138.1.gene2239. Protein 6e-36 41