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Name : rplS (CLD_2196) Accession : YP_001781987.1 Strain : Clostridium botulinum Okra Genome accession: NC_010516 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 2566096 - 2566440 bp Length : 345 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGTTAGAAGTTATAAAAGCTATAGAAGCAGAACAAGTAAGAAGTGATTTACCAGAATTCAATGTAGGAGATACTGTAAA AGTTCACCAAAAAATTAAAGAAGGAACTAGAGAAAGAGTTCAAGTATTTGAAGGAACAGTTTTAAAAAGACAAAATGGTG GAGCAAGAGAAACTTTCACAGTAAGAAGAGTTGCTTACAATGTAGCAGTTGAAAAAACTTTCCCAGTTAATTCACCATTA ATTGAAAAAATTCAAGTTGTAAGAAAAGGTAAAGTAAGAAGAGCTAAACTATACTACTTAAGAGATAGAGTAGGTAAAGC AGCAAAAGTTAAAGAAAGAATATAA Protein sequence : MLEVIKAIEAEQVRSDLPEFNVGDTVKVHQKIKEGTRERVQVFEGTVLKRQNGGARETFTVRRVAYNVAVEKTFPVNSPL IEKIQVVRKGKVRRAKLYYLRDRVGKAAKVKERI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 2e-29 | 58 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 6e-24 | 48 |
