Gene Information

Name : CLD_2280 (CLD_2280)
Accession : YP_001781905.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2483155 - 2483391 bp
Length : 237 bp
Strand : -
Note : identified by match to protein family HMM PF01381

DNA sequence :
ATGAAAAATAAATTAAAACAGTTTCGTGAAAATTTAGGATTAACGCAAGAGCAATTAGGTGAACTTGTAGGTGTATCAAG
ACAAGCAATTAATGCTATTGAAACAGGAAAATTTGAACCATCTATTTGGTTGGCTTATGATATTGCAAAAGTATTCCATG
ACACTATAGAAGAAGTTTTCCTTTTTGAAGAAAGTGAAAGAAAATCAAGATCAGAGAAAAGTAGAGGTGTAGTTTAA

Protein sequence :
MKNKLKQFRENLGLTQEQLGELVGVSRQAINAIETGKFEPSIWLAYDIAKVFHDTIEEVFLFEESERKSRSEKSRGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-10 44
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-05 44
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 8e-06 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLD_2280 YP_001781905.1 DNA-binding protein VFG2175 Protein 3e-06 44
CLD_2280 YP_001781905.1 DNA-binding protein VFG2168 Protein 3e-06 44