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Name : CLD_0604 (CLD_0604) Accession : YP_001779803.1 Strain : Clostridium botulinum Okra Genome accession: NC_010516 Putative virulence/resistance : Unknown Product : RNA-binding protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 213355 - 215511 bp Length : 2157 bp Strand : + Note : identified by match to protein family HMM PF00575 DNA sequence : ATGAACAATATAAACAGTATTTTATCAAAAGAACTTAACATATCCATTAAATATATAGATGCAGTTATAGATTTATTAGA TCAGGGAAATACAGTACCTTTTATAGCAAGATATAGAAAAGAAGTAACAGGAGGTATGAGTGACGAAACGCTTAGAGAGC TCTTTGAAAGGCTTACGTATTTAAGAAATTTAAGTTCTAAGAAAGAGGATGTTATAAGACTCATAGAGGAGCAAGGCAAA CTTACAGAAGAGCTTAAAACATCTATAATTAATTGTAAAACTGTTACAGAAGTAGAGGACTTATATAGACCTTATAGACC AAAAAGAAGGACAAGAGCTACTATAGCAGAAGAAAAAGGATTAAAGCCTTTAGCAGAAATAATATTAGAAGGTAATTTTA AAGAAGATATAAAAGTATATGCTAGTGAATTCATAAATGAAGAAAAAGAAGTAAAGACTATTGAAGAAGCTCTTCAGGGT GCTATGGATATAATAAGCGAAGTTATATCTGATGAAGCAGAATACAGAAAATGGATAAGGAATTTTGTTTTTAATGAAGG AGTAATAGAAACTAAAGGTGAAAGCATGGAACCTACTCCTTACGAAATGTATTATGATTATAAAGAAAATGTAAAAAATA TTCCTCCTCATCGAATACTAGCTATAAATAGAGGAGAAAAAGAAAAAATATTAACAGCAAAAGTTACTTGTAATGAAGAT AAAATAATAGATTATTTAAAAAGTAGATCATTAAAAGGAAATAAGGAAACGGATGTATATATAGAGGAGTCTGTTAAAGA TTCTTTAAAAAGATTAATATATCCATCCATAGAAAGAGAGATAAGATCAGAGTTAACAGAAAAAGGTGAAGAAGGGGCAA TAAAAATATTTAAAGAGAATCTAAAGGCCCTTTTGATGCAAGCACCTATAAAGGATAAAGTAGTTTTAGGATATGACCCA GGGTTTAGAACCGGATGTAAGATAGCAGTATTAGATGAAACAGGAAAATTATTAGATACAGCTACAGTTTATGCTACAGC ACCACAAAATGATGTAGAAGGTTCTATAAAAGTATTAAAAGAATTAATATACAAATATGATGTTGATGTAATATCTTTAG GAAATGGAACAGCTAGTAGAGAATCAGAAGAGGTTATATCAAAAATGCTTAAAGAAATAAAAGAAGAAAAAGGCAAAGAT ATATATTATGTTATAGTATCTGAAGCAGGAGCCTCTGTTTATTCTGCGTCAAAATTAGCTACAGAAGAATATCCAGATAT AAATGTTTCTTTAAGAGGTGCTATATCTATAGGTAGAAGACTTCAAGATCCTCTAGCAGAACTTGTAAAAATAGATCCTA AGTCTATAGGGGTAGGACAATATCAACACGATGTATCTCAAAAAAAATTAGATGAATCATTAAAAGGTGTGGTAGAAGAT TGTGTTAATGCGGTAGGAGTAGACTTAAATACTGCAACACCATCACTTTTATCTTATATTTCAGGCATTAATAGCTCTAT AGCTAAAAATATAGTAGCTTATAGAGAGGAAATAGGGAAATTTAAAAATAGAAAAGAATTATTAAAAGTAAAAAGGTTAG GACAAAAAGCCTTTGAGCAATGTGCAGGTTTTCTTAGAGTTATGGAAAGTAAAGAACCTTTAGATAATACAGGAGTCCAT CCAGAGTCCTATGAGGGAACCAAGAAGTTTTTAAGCTTGTTACAATATGATATAAAAGATGTAAAAAATAATAAATTACA GGATATAGATGATAGGGTTAATAATATAGGACTAGATGATATATGTAATAAAATAGATATAGGGAAACCTACACTATTAG ATATTATAAAAGAAATAAAAAAACCAGGAAGAGATCCAAGAGAAGATTTACCTAAACCTATATTAAAGACAGGGATTGTT GATATAACTCAATTAAAGCCAGACATGGTTCTAATGGGTACCGTTAGGAATGTAGCTGATTTTGGAGCCTTTGTAGACAT AGGAGTTCATCAAGATGGCTTAGTACATATAAGTCAACTTTCAGATAGCTTTGTAAAACATCCTTTAGATATAGTAAAAG TGGGAGATATAGTGGAAGTTAGAATATTGGAAGTAGATAAAAAGAGAAACAGAATCTCTTTAAGCATGAAAAAATAA Protein sequence : MNNINSILSKELNISIKYIDAVIDLLDQGNTVPFIARYRKEVTGGMSDETLRELFERLTYLRNLSSKKEDVIRLIEEQGK LTEELKTSIINCKTVTEVEDLYRPYRPKRRTRATIAEEKGLKPLAEIILEGNFKEDIKVYASEFINEEKEVKTIEEALQG AMDIISEVISDEAEYRKWIRNFVFNEGVIETKGESMEPTPYEMYYDYKENVKNIPPHRILAINRGEKEKILTAKVTCNED KIIDYLKSRSLKGNKETDVYIEESVKDSLKRLIYPSIEREIRSELTEKGEEGAIKIFKENLKALLMQAPIKDKVVLGYDP GFRTGCKIAVLDETGKLLDTATVYATAPQNDVEGSIKVLKELIYKYDVDVISLGNGTASRESEEVISKMLKEIKEEKGKD IYYVIVSEAGASVYSASKLATEEYPDINVSLRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLDESLKGVVED CVNAVGVDLNTATPSLLSYISGINSSIAKNIVAYREEIGKFKNRKELLKVKRLGQKAFEQCAGFLRVMESKEPLDNTGVH PESYEGTKKFLSLLQYDIKDVKNNKLQDIDDRVNNIGLDDICNKIDIGKPTLLDIIKEIKKPGRDPREDLPKPILKTGIV DITQLKPDMVLMGTVRNVADFGAFVDIGVHQDGLVHISQLSDSFVKHPLDIVKVGDIVEVRILEVDKKRNRISLSMKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-154 | 48 |
