Gene Information

Name : CLD_2483 (CLD_2483)
Accession : YP_001781705.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Virulence
Product : PTS system L-ascorbate family transporter subunit IIA
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1762
EC number : -
Position : 2297146 - 2297583 bp
Length : 438 bp
Strand : -
Note : identified by match to protein family HMM PF00359

DNA sequence :
ATGCTTAAAAATTATATAAACGATCAGGTTGTAGAAGTAAACGTGGAAGTAACAAACTGGGAAGAGGCAGTAAGATTAGG
AGGAAAGCTATTAGAGGAAGATGGAGCCGTAGAACATAGCTATATTGATGCTATGGTAGATACGGTAAAAAACATGGGAC
CATACATTGTAATAGCACCTGGAATAGCAATGCCTCATGCAAGACCTGAAGCTGGAGCTAAAAATATAAGAATTGGACTT
TTGAAGCTTAAAAATCCAGTTAATTTTGGCAACGAAGAACATGATCCTGTAGATATTGTTATATTCTTATGTGCTGTAGA
TAATAAGGCACACATTGAGGTTTTAGGGGAACTTGTTCAGCTTATAGAAGATGATGATTTTTTAAAGATTATACGAAATG
CATCAACAAAGAAAGAAATACTAGATTATATAAAATAA

Protein sequence :
MLKNYINDQVVEVNVEVTNWEEAVRLGGKLLEEDGAVEHSYIDAMVDTVKNMGPYIVIAPGIAMPHARPEAGAKNIRIGL
LKLKNPVNFGNEEHDPVDIVIFLCAVDNKAHIEVLGELVQLIEDDDFLKIIRNASTKKEILDYIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF10 AAK27337.1 unknown Not tested PAI-I AL862 Protein 2e-19 41
vpeA ADD91727.1 putative PTS system-specific IIA component VpeA Virulence PAI-I AL862 Protein 2e-19 41