Gene Information

Name : CLD_2600 (CLD_2600)
Accession : YP_001781588.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2173624 - 2173779 bp
Length : 156 bp
Strand : -
Note : identified by match to protein family HMM PF01381

DNA sequence :
ATGAAGCAGGAAGAATTAGCAAAGTTAGTAGGAGTAAGAAGAGAAACTATAGGACATTTAGAAAATGAAAAATATAATCC
ATCATTAAAATTATCCATGGATATTGCTAAAGTTTTTGGAAAATCAGTAGAGGAAGTATTTCAATTTGTGGATTAA

Protein sequence :
MKQEELAKLVGVRRETIGHLENEKYNPSLKLSMDIAKVFGKSVEEVFQFVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-06 45
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-06 45
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-06 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLD_2600 YP_001781588.1 DNA-binding protein VFG2168 Protein 2e-06 45
CLD_2600 YP_001781588.1 DNA-binding protein VFG2175 Protein 2e-06 45