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Name : CLD_2950 (CLD_2950) Accession : YP_001781238.1 Strain : Clostridium botulinum Okra Genome accession: NC_010516 Putative virulence/resistance : Unknown Product : glycosyl hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1777487 - 1779151 bp Length : 1665 bp Strand : + Note : identified by match to protein family HMM PF00128 DNA sequence : ATGAATAAGACATGGTGGAAAGAAGCTGTTGCATATCAAATATATCCAAGAAGTTTTAAGGATTCAAATGATGATGGTAT AGGAGATATAGAGGGTATAATTTCAAAATTAGATTATTTAAAAGATTTAGGTATAGATATAATTTGGATTTGTCCTATGT ATAAGTCTCCAAATGATGACAACGGTTACGATATAAGCGATTATAAAGCTATAATGGACGAATTTGGAACTATGGAGGAT TTTGATAAGTTACTACAAAAGGCCCATGAAAAAGGTATGAAGCTTATAATAGATTTAGTTATAAATCATACCAGTGATGA GCATAAATGGTTCATTGAATCAAGATCTTCTAAAGATAATCCAAAACGTGATTTTTATATATGGCGTGATGGTAAAGATG GAAAGGAACCTAACAATTGGGAAAGTATATTTAAAGGTTCTGCCTGGGAATATGACTATAATACAGAACAATATTTTCTT CACTTATTTAGTAAAAAGCAGCCAGATTTAAATTGGGAAAATGAAAATGTTAGAAAAGAATTATATAAAATGATTAACTG GTGGTTAGATAAGGGAATTGATGGATTTAGAGTAGATGCTATAAGTCATATAAAAAAAGAAAAGGGATTAAAAGACATAC CTAATCCAAAAAATTTAGATTATGTTCCTTCTTTTGAAAAACATATGAATGTAGAAGGAATTCAAAAATATCTTAAAGAA TTAAAGGAAAATACCTTTGATAAATATGACATAATAACTGTGGGAGAAGCCAATGGAGTAAATATAAGTCAAGCTCCTCA ATGGGTAGGAGAAAAAGATGGCAAATTTAATATGATATTTCAGTTTGAACATCTAGATCTTTGGGATGTAGATCATAAAG AACAGTCTACAATAAAAAAATTAAAAGAAGTATTAAGCAAATGGCAGGAAGGTTTAGAAGGAGTTGGATGGAATGCTTTG TTTATAGAAAATCATGATATTCAAAGGGTAGTCTCAACTTTAGGAGATGATAAAAACTTCTGGGAAGAAAGTTCAAAAGC CTTAGCTCTTATATATTTTATGCAAAAGGGGACTCCATTTATATATCAAGGACAAGAAATAGGAATGACTAATGTTAAAT TTGAAGATATTGAAGATTATAATGATATAAAAACTATAAATATTTATAAAGAAAAAATAAAAAAAGGTATACCAAAAGAT CAAGCCCTCAAATATGTATGGGAAACTTCAAGAGATAACTCAAGAACACCAATGCAATGGGATACCACAGAAAATGCTGG ATTTTCAAAAGAAAAACCTTGGATGAAAGTTAATCCGAACTATGTGGATATAAACGTTAGGGGACAAGAAAATAACCTAA ATTCTATTTTGAACTTTTATAAAAAAATTATAAGAGTAAAGAAAGAAAATGAGGCACTTATATACGGAAAATATAATTTG ATTTTAGCGCATCATGAACAAATATATGCTTACACAAGAACTTTAGGAAATGAAAAATTTATAGTAATTGCTAATTTAAC AAATAAGGAAGCTAAATATACTTATAAAAGAGAAAAACTAAATTATAAAGGATTGATAATTTCAAACTATTCAATAGAGA AACATGAGGATATAACAGAAATATTATTAAAGCCTTTTGAAGCGAGACTTTATAAAATAGTTTGA Protein sequence : MNKTWWKEAVAYQIYPRSFKDSNDDGIGDIEGIISKLDYLKDLGIDIIWICPMYKSPNDDNGYDISDYKAIMDEFGTMED FDKLLQKAHEKGMKLIIDLVINHTSDEHKWFIESRSSKDNPKRDFYIWRDGKDGKEPNNWESIFKGSAWEYDYNTEQYFL HLFSKKQPDLNWENENVRKELYKMINWWLDKGIDGFRVDAISHIKKEKGLKDIPNPKNLDYVPSFEKHMNVEGIQKYLKE LKENTFDKYDIITVGEANGVNISQAPQWVGEKDGKFNMIFQFEHLDLWDVDHKEQSTIKKLKEVLSKWQEGLEGVGWNAL FIENHDIQRVVSTLGDDKNFWEESSKALALIYFMQKGTPFIYQGQEIGMTNVKFEDIEDYNDIKTINIYKEKIKKGIPKD QALKYVWETSRDNSRTPMQWDTTENAGFSKEKPWMKVNPNYVDINVRGQENNLNSILNFYKKIIRVKKENEALIYGKYNL ILAHHEQIYAYTRTLGNEKFIVIANLTNKEAKYTYKREKLNYKGLIISNYSIEKHEDITEILLKPFEARLYKIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-126 | 50 |
