Gene Information

Name : CLD_2970 (CLD_2970)
Accession : YP_001781218.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Virulence
Product : antibiotic ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1753017 - 1753724 bp
Length : 708 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGGAAAAATATATTTTACAAACAAAAGATATTTGTAAAGTCTTTAAAGGTCAGCATGCAGTAAACAATATTTCAATTAC
AGTGAGAGAGAATTCTGTGTATGGATTATTAGGGCCTAATGGGGCAGGAAAATCTACTATGTTAAAAATGTTAACAGGAA
TGTTACGTCCCACATCCGGGAAAATTATATTTGACAATCATCATTGGACTAGAAAGGATTTAGTGAGTATTGGCGCTCTT
ATTGAAGCTCCACCCCTTTATGAAAATTTAACTGCAAGGGAAAATTTAAAAGTTCGTACTACTCTTTTAGGATTAAAAGA
CTCACTGATTGATGAAGTATTAAAAATTGTTGATTTAACCAATACAGGTAAAAAAACCGCTGGTAAGTTTTCAATGGGTA
TGAAACAACGTTTAGGGATTGCCATTGCTCTAATTAACAATCCTAAACTATTGATATTAGATGAACCAACAAATGGTCTT
GATCCTATTGGTATTCAAGAGTTACGTGAATTAATTCGATCATTTCCAAAGCAAGGAATAACAGTTATTTTATCTAGTCA
TATTTTAGCGGAGGTTCAGCTTATTGCAGACCACATTGGAATTATAAGTAATGGGATCTTAGGATATGAAGCAAAAATTA
ATCCTTCAGAGAATTTAGAAACACTTTTCATAGAAGTAGTAAAAAAGAATAAAAAAAGGAGGGCATAA

Protein sequence :
MEKYILQTKDICKVFKGQHAVNNISITVRENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDNHHWTRKDLVSIGAL
IEAPPLYENLTARENLKVRTTLLGLKDSLIDEVLKIVDLTNTGKKTAGKFSMGMKQRLGIAIALINNPKLLILDEPTNGL
DPIGIQELRELIRSFPKQGITVILSSHILAEVQLIADHIGIISNGILGYEAKINPSENLETLFIEVVKKNKKRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 1e-44 51
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 1e-44 51
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 1e-44 51
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 1e-44 51
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 1e-42 51
cdd4 CAA63569.1 - Not tested PaLoc Protein 1e-43 50
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 1e-40 43
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 8e-41 43
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 6e-31 43