Gene Information

Name : CLD_3324 (CLD_3324)
Accession : YP_001780868.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1375297 - 1376028 bp
Length : 732 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGAAAAAGGAATATGTAATTGAGATACATGATTTAACGAAAGAGATTGATGGAAAAGCCATACTGTCTGGCATTACAAT
GAATGTAAAAAGAGGAGAGATATATGGTTTTTTAGGGGCAAATGGTGCAGGAAAAACTACCTTGATGAAAACTATATACG
GTATTCTAAAACCTACTTCGGGATCAATTTGTATTTTTGAAAATGAACTGAAAGAAAATAATTGTGCTGTTTTTAGTAAA
ATGGGTAGTTTGATTGAGATTCCAGTTTTTTATCATAACTTTTCAGCCTATAAAAATCTTGAATTACATTGTGGCTACAT
GGGAGAGCAATACATTCAAAATATTGAAAAAGTGTTGGATATGACAGGCATAAGGAACCAAGGTGATAAGCCTGTTAAAG
AATTTTCGTTGGGTATGAAACAAAGGCTTGCATTAGCTAGGGCTATCCTGACAAATCCAGAGTTATTGATTTTAGATGAA
CCAATCAACGGGTTAGATCCACAAGGTATAATAGAAATCAGGGAACTGCTTTTGCAAATTAATCGTGAGAATGGAACGAC
CATTCTTATTTCCAGTCATATTTTGAGTGAGATGGCTAAGACAGCAGATAGGATTGGTGTGATTGATAAAGGCATAATAT
TAAAAGAAATTTCTATGACAGAAATAGTGGATAAAGGAATAGAGCTAGAATCCTACTATTTAGAATTGCTAAAAGGAGGA
AATGCTTTATGA

Protein sequence :
MKKEYVIEIHDLTKEIDGKAILSGITMNVKRGEIYGFLGANGAGKTTLMKTIYGILKPTSGSICIFENELKENNCAVFSK
MGSLIEIPVFYHNFSAYKNLELHCGYMGEQYIQNIEKVLDMTGIRNQGDKPVKEFSLGMKQRLALARAILTNPELLILDE
PINGLDPQGIIEIRELLLQINRENGTTILISSHILSEMAKTADRIGVIDKGIILKEISMTEIVDKGIELESYYLELLKGG
NAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 1e-34 46
SH2304 YP_254219.1 ABC-type multidrug transport system, ATPase Not tested ¥ðSh1 Protein 6e-33 44
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-26 43
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-26 43
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-26 43
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 1e-26 43
SSU05_0946 YP_001198312.1 hypothetical protein Not tested 89K Protein 8e-39 43
SSU98_0954 YP_001200512.1 hypothetical protein Not tested 89K Protein 8e-39 43
cdd4 CAA63569.1 - Not tested PaLoc Protein 3e-34 42