|
Name : CLD_3375 (CLD_3375) Accession : YP_001780817.1 Strain : Clostridium botulinum Okra Genome accession: NC_010516 Putative virulence/resistance : Virulence Product : pyruvate ferredoxin oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 1318595 - 1322113 bp Length : 3519 bp Strand : - Note : identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176 DNA sequence : ATGGCAAAAATTATGAAAACAATGGATGGAAACCAAGCAGCTGCTGAGGCATCCTATGCTTTTACTGAAGTTGCAGCTAT CTATCCAATTACACCTTCCACCCCTATGGCAGAAGGTGTAGACGAGTGGTCGGCTCATGGAAAGAAAAATATATTTGGTC AGTCTGTAAAAGTTGTTGAAATGCAATCTGAAGCTGGAGCTTCCGGAACTGTTCATGGATCATTAGCCGCTGGTGCACTT ACAACTACATACACTGCTTCTCAAGGTTTGTTGTTAATGATTCCTAACTTATATAAAATAGCTGGAGAACTATTACCTGG TGTATTTCATGTATCTGCCAGAGCCCTAGCCACTCATGCTTTATCAATTTTTGGTGATCATCAAGATGTAATGGCTACAA GGCAAACTGGTGTAGCACTTTTAGCAGCTTCGAATGTTCAAGAAGTAATGGACTTAGCAAATATAGCACATCTATCTGCT ATTAAATCTAGAGTTCCATTCTTACACTTTTTTGATGGCTTTAGAACTTCTCACGAATACCAAAAAATCGAAACTATTAA TTATGATGATGTAGCTAAATTAGTAGATTATGATGCTCTAAAAGAATTTAAATCTAGAGCATTAAATCCAGAACATCCTA CTCTTAAAGGCACAGCCCAAAATCCAGATATTTATTTTCAAGGAAGAGAAGCATCAAATAAGTTCTATGAAGAAGTCCCT AATATTGTTGAAAACTACATGAGAGAAATAGAAAAAATTAGTGGAAGATCCTATCATCCTTTTGATTATTATGGAGCTCC TGATGCAGAGAATGTAATAGTAGCTATGGGTTCTATTTGTGACACTATAGAAGAAACAGTAGACTATTTAATAAATAAAG GACAAAAGGTAGGAGTTATAAAAATTCACTTATATCGTCCATTTTGTCCAACATATTTTATGAAAGCATGCCCTAAAACT GTTAAAAAAATTGCTGTTCTTGACCGTACAAAAGAACCTGGTTCAATAGGAGAGCCTATATATCTTGATGTATGTAAAGT ATTCTATAATACAAAGGATAAACCTATTATTGTAGGTGGTAGATATGGGTTAGGATCCAAAGATACAAGACCTTCTCAAA TTATTTCAGTATTTGATAATTTAAATCAGGATAATCCTAAGGATGGATTCACAATAGGAATTACTGATGATGTTACCAAT ACATCATTGCCTGAAAAGGATGTAGTTGACACAACTCCTGAAGGTACCATAAGTTGCAAATTCTGGGGATTAGGTTCTGA TGGAACAGTAGGTGCAAATAAAACTGCTGTAAAAATTATTGGAGATAATACAGATTTATATGCTCAGGCATACTTTTCTT ATGACAGTAAAAAATCTGGCGGCAGCACCATTTCCCACTTAAGATTTGGAAAGGATAAGATAAAATCACCTTATTTAATT TATAATGCAGATTATATTGCTTGCCATAACAAATCCTTTATATACAATTTTGATGTCCTAAAAGGATTAAAGAAAAATGG CACATTTGTATTAAATTGTCCTTGGGATGAAGCAGAACTAGAAGAAAAACTACCAGCTTCTATGAAAAAATATATAGCAG AAAATAATATAAATTTTTATATTATTGATGGTATATCTATTGCACAAAACATAGGTTTAGGCGGTCGAATTAATATGATA ATGCAATCTGCGTTCTTTAAATTAGCTAATGTTATACCTGTAAATGAAGCTGTAGAGCTTTTAAAGAATTCAGTTGAAAA AACTTATGGTAAAAAAGGTGAAAAGATTGTAGAAATGAACAAAGCAGCTATTGATACAGGTATTGATGCAGTACACAAGG TTAATATTCCATCTTCATGGAAAAATGCTGAAGTTGAGCCAACATCAATAAAAGAAGAACCTGATTTTATAAAAAAAGTT CAAAGACCTATGTCTAGACATGAAGGAGATGAACTTCCTGTTAGTGCTTTTAATGGAATGGAAGATGGTACTTTTCCATT AGGAACCACTTCTTACGAAAAACGTGGTATTGCTGTTATGATTCCAGAATGGCAAATTGATAAATGCATTCAATGTAATC AATGCTCCTATATTTGCCCTCATTCAGTAATAAGAGCCTACTTATTAAATAAAGATGAAAAAGAAAAATCACCTAGCGCA TTTGAAACAAAAAAAGCTACAGGAAAAGGATTAGAAGAACTAGGATATCGTATTCAAATAAGTCCATTAGATTGTACAGG ATGTGGTAATTGTGCGGATGTTTGTCCAGCACCAGGTAAAGCCTTAATTATGAAAAATGCCGAAGAACAAATTGAAATGC AATCTGAAAACTGGGAATTTGGTCTTAATATTACTACTAAAGAAAACTTAATGGATCCAAAAACATTAAAAGGCAGCCAA TTCATAAGACCATTATTAGAGTTTCATGGAGCTTGTCCTGGATGCGGAGAAACTCCATATATTAAACTTCTAACACAACT TTTTGGGGATAGAATGATGATTGCCAATGCTACTGGATGTTCATCTATTTGGGGAGGTAGTGCTCCATCAATTCCATACA CTACAAATTCCCAGGGAAAAGGCCCTTCCTGGGGAAATTCTCTATTTGAAGATAATGCTGAATATGGTTATGGGATGTAC CTTGCAGTAAAACAAATTAGAGAAAAATTAGCTGAATTAATGCAAGAAGCATTAAATATGGAAATTAATCAGGACCTTAA AAATGCTTTTAAACAATGGTTAGAGTCAATGGATGATGGTGAGCACTCAAAAACTGCTACGGCAAAAATACTAGAAACTA TGCCAAATGAAAATTATCAAAATAATCCTATCCTAAACGAGATAATGGAGAAAAAAGATTATCTTATAAAAAAATCTCAT TGGATGATAGGTGGAGATGGTTGGGCATATGATATAGGTTTTGGCGGCTTAGACCATGTGTTAGCTTCTGGAGATGATGT TAATATATTTGTAATGGATACAGAGATCTATTCTAATACTGGTGGTCAATGCTCTAAGTCTACTCAAACTGGTGCTATAG CTAAATTTGCTGCTGCTGGTAAAAAAATTAAGAAAAAAGATCTTGGATTAATGGCAATGAGTTATGGATATGTATATGTA GCTCAAATAGCCATGGGCGCAAATATGAACCATACTATTAAAACAATTGCGGAAGCAGAAGCATATAAAGGACCTTCATT AATAATTGCATATGCTCCTTGCATTAGTCATGGAATAAAAACAGGCATGGGAACAAGTATAGCAGAGGAGAAAAAAGCAG TAGAATCAGGTTATTGGCATCTTTATAGATATAATCCAATGCTAAAAGAAGAAGGTAAAAATCCATTCACCTTAGATTCA AGAGAACCAACAAAATCTTTTAAAGAATTTATTCAAGGAGAAGTTCGTTACTCTTCTCTAATGAATATATTTCCTGGCAT TGCTGAAAAAATGTCAGATATGGCTGAACAACATGCTCGTGAAAGATACGACAACTATAAACATTTAGCAGATAAATAG Protein sequence : MAKIMKTMDGNQAAAEASYAFTEVAAIYPITPSTPMAEGVDEWSAHGKKNIFGQSVKVVEMQSEAGASGTVHGSLAAGAL TTTYTASQGLLLMIPNLYKIAGELLPGVFHVSARALATHALSIFGDHQDVMATRQTGVALLAASNVQEVMDLANIAHLSA IKSRVPFLHFFDGFRTSHEYQKIETINYDDVAKLVDYDALKEFKSRALNPEHPTLKGTAQNPDIYFQGREASNKFYEEVP NIVENYMREIEKISGRSYHPFDYYGAPDAENVIVAMGSICDTIEETVDYLINKGQKVGVIKIHLYRPFCPTYFMKACPKT VKKIAVLDRTKEPGSIGEPIYLDVCKVFYNTKDKPIIVGGRYGLGSKDTRPSQIISVFDNLNQDNPKDGFTIGITDDVTN TSLPEKDVVDTTPEGTISCKFWGLGSDGTVGANKTAVKIIGDNTDLYAQAYFSYDSKKSGGSTISHLRFGKDKIKSPYLI YNADYIACHNKSFIYNFDVLKGLKKNGTFVLNCPWDEAELEEKLPASMKKYIAENNINFYIIDGISIAQNIGLGGRINMI MQSAFFKLANVIPVNEAVELLKNSVEKTYGKKGEKIVEMNKAAIDTGIDAVHKVNIPSSWKNAEVEPTSIKEEPDFIKKV QRPMSRHEGDELPVSAFNGMEDGTFPLGTTSYEKRGIAVMIPEWQIDKCIQCNQCSYICPHSVIRAYLLNKDEKEKSPSA FETKKATGKGLEELGYRIQISPLDCTGCGNCADVCPAPGKALIMKNAEEQIEMQSENWEFGLNITTKENLMDPKTLKGSQ FIRPLLEFHGACPGCGETPYIKLLTQLFGDRMMIANATGCSSIWGGSAPSIPYTTNSQGKGPSWGNSLFEDNAEYGYGMY LAVKQIREKLAELMQEALNMEINQDLKNAFKQWLESMDDGEHSKTATAKILETMPNENYQNNPILNEIMEKKDYLIKKSH WMIGGDGWAYDIGFGGLDHVLASGDDVNIFVMDTEIYSNTGGQCSKSTQTGAIAKFAAAGKKIKKKDLGLMAMSYGYVYV AQIAMGANMNHTIKTIAEAEAYKGPSLIIAYAPCISHGIKTGMGTSIAEEKKAVESGYWHLYRYNPMLKEEGKNPFTLDS REPTKSFKEFIQGEVRYSSLMNIFPGIAEKMSDMAEQHARERYDNYKHLADK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 56 |
