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Name : CLD_3507 (CLD_3507) Accession : YP_001780685.1 Strain : Clostridium botulinum Okra Genome accession: NC_010516 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1167893 - 1169695 bp Length : 1803 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGAACAAGAAAAAGAAAGGTATTCCAAGGCTATTGGAAATAGCTGGAGAAAAGCAAGGGCTACTTATTTGCTCATCCAT ATTTTCAGCTATCAGTGCAATTTTAATGCTATTACCATATATAGCGGTTTATTTTATAATGGCGGAACTTTTAAAAAATG CTGCAAACCCTAGAAATGTTAATTCTGCACAAATGCTACACTGGGGTACTGTTGCTCTTGTAGGATTGGTAGGAGGAATT GTTTTCATGTATATATCTGGGTTAATGTCTCATACAGCAGCATACAGGATATTATATAGCTTAAGAGTTCGTATGTCAGA GCATATTGGTAAATTACCTCTAGGCTATTTAAGCAACACATCAACGGGTATAGTAAAGAAAACCTTTGAACAAAATGTAG AAAAGATTGAAGCCTTTGTTGCTCACCAGTTACCGGATATGGTAAATGTATTTGTAACAATGATTATTACAATAATTATG ATGCTAACTTTAAATCCATGGCTTACATTGGCTGCTATGGTACCACTTGTTTTGGGATTCTTAATACAGATGAAAAAAAG AAGTGGTAAGGCTGCAGAGGAAAGTGCAAAAAAATACTATAATGCCTTAGAGAGAATCAACTCATCAACTATTCAATATG TAAAAGGAGTGCCTGCTGTAAAGATATTTGGTAGAAACGTATATTCTTTTCGCAAATTTTATGATGATATGATATCTTAC AGGGATTATTGTGTAAAGTATACAGATCAGTATCAAAATACCTATATAACTTCAAAGGTATTATTAAATTCAACTTTAAC ATTTATATTACCAGTGGGTATTCTTTTAATGGGAGGAAGATCAGGAGATCTTTCCTTTGTACAAGCTCTTTTATTTTTTA TTATTTTAGCACCAGGAGTTGCGTCACCTATGTTGCGTTTTATGACTTTTGCATCTTCATTAGGAGATATTTCTGAGGGA GTTCAGCGTATTGATAAGATCTTTGCTGAGAAAACTATTTGTGAGGCAAAGAATCCTAGGATACCTTCCTCTTATGATAT TGAGTTTGATAATGTGTCCTTTTCTTATGAGTCTGAGGACACATCCACTAGGAAAGAAGCATTATCAAAAGTAAGTTTTA AGGCGAAAAAAGGTTCATGTACAGCACTTGTAGGACCTTCAGGTTCTGGAAAATCTACAGTGGCTAACCTTATTCCACGT TTTTGGGATATTCAAAAAGGTCATATTAGAATCGGTGGAATAGATATTAAAGAAATTTCTACAGAGAATTTGATGGATTT AGTTTCCTTTGTTTTTCAAGATACATTTTTATTTCATGATACCTTATATGAAAATATCCGTGTAGGCAGACCAGATGCCA CAAAGGAAGAAATATTTAAGGCTGCAAAAGCTGCTCAGTGTCATGAGTTTATTACAGGACTTGAAAATGGTTATGACACT ATTGTTGGTGAAGGAGGCACTCATCTTTCAGGCGGTGAAGAACAAAGAGTATGTGTGGCAAGAGCAATTTTAAAAAATTC TCCTATACTAGTTTTAGATGAAGCTACTGCTTTTTCAGATCCAGAAAATGAGTATCATATGCAGCTGGCTCTAAGGGAGC TTATGAAGAATAAAACTGTTATTATGATTGCACATAGGCTAACAACTATTAAAGATGCTGAAAATATAGTGGTTATGGAA GATGGAGCTATTGTAGAGGCAGATACTCATGATGTACTTATAAATAAAGATGGATTGTATAAAAAGCTTTGGAACTCATA TACAGTGGCCTCTAATTGGGGTATAAGTAAAGGAGGGATTTAG Protein sequence : MNKKKKGIPRLLEIAGEKQGLLICSSIFSAISAILMLLPYIAVYFIMAELLKNAANPRNVNSAQMLHWGTVALVGLVGGI VFMYISGLMSHTAAYRILYSLRVRMSEHIGKLPLGYLSNTSTGIVKKTFEQNVEKIEAFVAHQLPDMVNVFVTMIITIIM MLTLNPWLTLAAMVPLVLGFLIQMKKRSGKAAEESAKKYYNALERINSSTIQYVKGVPAVKIFGRNVYSFRKFYDDMISY RDYCVKYTDQYQNTYITSKVLLNSTLTFILPVGILLMGGRSGDLSFVQALLFFIILAPGVASPMLRFMTFASSLGDISEG VQRIDKIFAEKTICEAKNPRIPSSYDIEFDNVSFSYESEDTSTRKEALSKVSFKAKKGSCTALVGPSGSGKSTVANLIPR FWDIQKGHIRIGGIDIKEISTENLMDLVSFVFQDTFLFHDTLYENIRVGRPDATKEEIFKAAKAAQCHEFITGLENGYDT IVGEGGTHLSGGEEQRVCVARAILKNSPILVLDEATAFSDPENEYHMQLALRELMKNKTVIMIAHRLTTIKDAENIVVME DGAIVEADTHDVLINKDGLYKKLWNSYTVASNWGISKGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-114 | 43 |
