Gene Information

Name : CLD_3595 (CLD_3595)
Accession : YP_001780597.1
Strain : Clostridium botulinum Okra
Genome accession: NC_010516
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1077623 - 1078345 bp
Length : 723 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGGAGACAATATCTTTAAGTAATAAAAAAATATTAATAATTGATGACGAAGAAGATATAGTTAGATTAATAAGAACAGT
ACTTAAAAAAGAAGGATTTCAAAATATATATTATGCTACTAACTTAGAAGATGGATTTAAAGAATTTAATAAGACGGAGC
CAGATATTGTAATTTTAGATATTATGTTACCAGATGGTGAGGGGTATGAATTATGTAAAACCATAAGATCTAAATCTAAG
GTGCCTATACTATTTTTATCTGCTAAGGGTGAAGAAATAGATAAAATATTGGGATTTGCTATAGGTGGAGATGATTATAT
AACTAAACCTTTTAGCACAAAGGAGTTAGCCTATAGGGTGAAGGCTCATTTAAGAAGATATTCCTATGTGGAAAATGTTA
ACGAGGAAAAAAACATTTTATCCTTTGGACCATTTGAGCTAAATATAAGTAAAGCAGAATTTAAAAAAGATGGAGAGCTT
ATAGAATTAAAACCTAAAGAATTAGCATTAATAACTTTTTTTGCAAAGCATCCAAATCAAATAATAAGTAAAGAAAAAAT
TTGTGATAATGTTTGGGGGGAAGATTATTATGGATTTGATAATACAATAATGGTCCACATTAGAAGACTTAGAGAAAAAA
TTGAAAAAGAACCATCAAGACCAGAATATTTAATAAATGTTAAGGGATTAGGATACAAATTGGTGATAAAAAATGAAAAA
TAA

Protein sequence : 
METISLSNKKILIIDDEEDIVRLIRTVLKKEGFQNIYYATNLEDGFKEFNKTEPDIVILDIMLPDGEGYELCKTIRSKSK
VPILFLSAKGEEIDKILGFAIGGDDYITKPFSTKELAYRVKAHLRRYSYVENVNEEKNILSFGPFELNISKAEFKKDGEL
IELKPKELALITFFAKHPNQIISKEKICDNVWGEDYYGFDNTIMVHIRRLREKIEKEPSRPEYLINVKGLGYKLVIKNEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 5e-39 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLD_3595 YP_001780597.1 DNA-binding response regulator NC_012469.1.7685629. Protein 4e-38 45
CLD_3595 YP_001780597.1 DNA-binding response regulator NC_012469.1.7686381. Protein 3e-32 42