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Name : Bcenmc03_5941 (Bcenmc03_5941) Accession : YP_001779552.1 Strain : Genome accession: NC_010515 Putative virulence/resistance : Virulence Product : type III secretion protein SpaR/YscT/HrcT Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 3135115 - 3135924 bp Length : 810 bp Strand : + Note : TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; KEGG: bam:Bamb_5849 type III secretion protein SpaR/YscT/HrcT DNA sequence : ATGATCGATCCGTTCTCAACCGGCATTCCGCAGCTTGGGCGCGCGCTGCTGTCGTTCATGATCCTGGTCGCCGTCTGCGG TGTGCGTCTGCTCGTGCTGATGACGATCTTTCCACCGACGGGCGGCGAGTTGATCACGAAGCGCATCCGCAATGCGATGG TCGTGTTGTGGTCGATCTACGTCGCTTACGGACAGCAGGCGCTCATGACGCAACTGCATGGCGGATTCCTGCTGGCCGTC GTCGTCAAGGAGGCCGTCATCGGGCTGGTGATCGCGTTCGTCGCGTCGCCGGTGTTCTGGGTCGCGGAAGCCGTCGGCAC CTATATCGACGATCTCACCGGCTACAACAACGTGCAGATCACGAACCCGAGCCTCGGACAGCAGACGACGCTGACCTCCA CGCTGCTGATGCAATGCGCGACCGTTGCGTTCTGGACCCTCGGCGGCATGACGTTCCTGCTCGGCGCGGTGTTCCAGACC TACGTGTGGTGGCCGCTCGGCAGCCTGACGCCCGTGCCGCGCGCATTCATCGAGGCGTTCGTGATGCAGCAGACGGATTC GCTGATGGTCACGATCGCGAAGCTCGCCGGGCCGGCGGTGCTGCTGTTGCTGCTCGTCGACGTCGGGGTAGGGCTGCTGT CGCGGATCGCGTCGAAACTCGATCTCGTCTCGCTCGCGCAGCCGGTCAAGGGCGCGCTGGCCGTGCTGTTGCTCGCGCTG ATGATCGGCATGTTCATCGGACAGGTGAAGGACCAGGTTGCGTTGCTGCATGTCGGCGACCAGTTGCGCGCGCTCGCGCT GCCGAGGTAA Protein sequence : MIDPFSTGIPQLGRALLSFMILVAVCGVRLLVLMTIFPPTGGELITKRIRNAMVVLWSIYVAYGQQALMTQLHGGFLLAV VVKEAVIGLVIAFVASPVFWVAEAVGTYIDDLTGYNNVQITNPSLGQQTTLTSTLLMQCATVAFWTLGGMTFLLGAVFQT YVWWPLGSLTPVPRAFIEAFVMQQTDSLMVTIAKLAGPAVLLLLLVDVGVGLLSRIASKLDLVSLAQPVKGALAVLLLAL MIGMFIGQVKDQVALLHVGDQLRALALPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB8 | YP_198732.1 | protein HrpB8 | Virulence | Hrp PAI | Protein | 2e-37 | 48 |
| hrpB8 | BAB07850.1 | HrpB8 | Virulence | Hrp PAI | Protein | 1e-37 | 48 |
| hrpB8 | AAF61279.1 | HrpB8 | Virulence | Hrp PAI | Protein | 1e-37 | 48 |
| hrcT | NP_640769.1 | HrcT protein | Virulence | Hrp PAI | Protein | 8e-38 | 48 |
| hrcT | AAP34337.1 | HrcT | Virulence | Hrp PAI | Protein | 6e-38 | 48 |
| XC_3004 | YP_244072.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 8e-38 | 47 |
| hrcT | NP_636612.1 | HrpB8 protein | Virulence | Hrp PAI | Protein | 8e-38 | 47 |
| hrpB8 | AAB08463.1 | HrpB8 | Virulence | Hrp PAI | Protein | 3e-38 | 47 |
| hrcT | YP_362165.1 | HrcT protein | Virulence | Hrp PAI | Protein | 4e-38 | 47 |
