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Name : Bcenmc03_5931 (Bcenmc03_5931) Accession : YP_001779542.1 Strain : Genome accession: NC_010515 Putative virulence/resistance : Virulence Product : HrcV family type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 3125645 - 3127699 bp Length : 2055 bp Strand : - Note : TIGRFAM: type III secretion protein, HrcV family; PFAM: type III secretion FHIPEP protein; KEGG: bte:BTH_II0751 type III secretion inner membrane protein SctV DNA sequence : ATGTTCAAGAATCTGAAGTTGCCCGCGGGCGGCGAGGTCGGCATCGCGGCCCTCGTCACGGCCATCGTTTCACTGATGAT CCTGCCGCTGCCGCCGGTCGTGATCGACATGCTGCTGTCGGTCAACATCTGCATCAGCGTCGTGCTGCTGATGGTCACGC TGTACGTGCCGTCGATCACGCAGCTGTCGGCGTTTCCGTCGGTGCTGCTGTTCACGACGCTCTACCGGTTGTCGCTCAAC ATCGCGTCGACCAAGTCGATCCTGCTGCACGCCGACGCGGGGCACATCATCGAGAGCTTCGGTGAGCTCGTGGTCGGCGG CAACCTCGTCGTGGGCCTCGTCGTGTTCCTGATCATCACGACCGTTCAGTTCATCGTGATCGCGAAGGGTTCGGAACGGG TGGCCGAAGTCGGTGCGCGGTTCACGCTCGACGCGTTGCCCGGCAAGCAGATGAGCATCGACGCGGACTTGCGCGCGAAC CTGCTGACGCCCGACGAGGCGCGCCGCAAGCGCGCGCGCCTCGCGGTCGAAAGCCAGCTCTACGGCGGCATGGACGGCGC GATGAAGTTCGTCAAGGGCGACGCGATCGCCGGACTCATCATCACGCTCGTCAACATGACGGCCGGCATCGCGGTCGGCG TGGCCTATCACGACATGACGGCCGGCGACGCGGCGAACCGCTTTTCGATCCTGTCGATCGGCGATGCGATGGTGTCGCAG ATCCCGTCGCTGCTGATCGCGGTATCCGCGGGCGTGATGATCACGCGGGTATCCGACGAGTCGGCCAAGCAAGGCAGCTC GCTCGGCGAGGACATGTTGCGCCAGCTCGGCGGCAACGCGCGCGCGATGCTGTTCGCGGCGGTGCTGCTCCTCGGCTTCG CGATGGTGCCCGGCTTTCCATGGGAACTGTTCCTGCTGCTGTCCGCGCTGCTCGGGTTCGCCGGTTACCGGCTCGCGCGG CGCGGCGACGGCACGTCGTCGGCCGCGCCGGGCAAGACGGTCGCGGCGCTGCAGCGCGCGGGCTCGAAAGGCGACGCGCC GACGATCCTCCGGCACGCGCCGCAGTTCACCAGCGCGCTCGGCGTGCGGCTCGCTCCCGATCTCGCCGACCGCCTGTCGG CCACCGCGCTGAACGATGCGTTCGAGACGCAGCGCATGCTGCTCCAGGAGCAGATCGGCCTGCCGTTCCCGGGCATCACG ATGTGGACCGCGTCCGACCTGGCGGCTGGCACGTTCGAGATTCTCGTGCTGGACGTCCCGTCGCTGACCGTGACGATTCC GCCCGGCAAGGTCATGGTGCCCGGCGCGGCGACCGACCCGGCGCTGGCCGCGCAATGCGAGAAGGCCGGCGCGGCGGCCG GCCAGGCGGACAGCTACTGGGCGCCGGAACGCCAGCCGCCCGGCGGCGCGACGGTGTGGCGCGCGGAACAGGTGATCGCC AACGACACGATCGCGCTGCTGCGCGCCCGCGCGAAGCTGTTCGTCGGCATCCAGGAAACCCAGTGGGTGCTGGAGCAGCT CGGCGCCGAATTCCCCGGGCTCGTCGCCGAGGTGCAGAAGGCGTTGCCGCTGCAGCGGATCGCCGACGTGCTGCGGCGCC TGCTGGAAGAGAACGTTCCGATCCGCAACGCGCGCAGCATCATGGAGAGCCTCGTGAACTGGGGGCCGAAGGAGAAGGAC ATGCTGCTGCTGACGGAATACGTGCGCGGCGATCTCTCCCGGTATATCGCATACAGCGCGACGGGCGGCGCCGCGTCGTT GCAGGCCGTCCTGTTCACGAGCGACCTGGAACAGCACATTCGCCAGTCGATCAAGCAGACGCCGACCGGCAACTATCTCG CGCTCTCGCCCGACGAAGTCCGCACACTCGCGGAGCGGATCGGCGCTTACGTGGGCGACGTGCCGCACGACGAAGTCGCG CTCGTCACGTCGATGGACATCCGCCGCTACGTGCGGCGCATGGTCGAGGCGCACCTGCCGTGGCTGCGCGTGTACTCGTA CCAGGAGCTCGGCGATTACGTCGAACTGCGCCCGCTCGGTCGCGTCACGACATGA Protein sequence : MFKNLKLPAGGEVGIAALVTAIVSLMILPLPPVVIDMLLSVNICISVVLLMVTLYVPSITQLSAFPSVLLFTTLYRLSLN IASTKSILLHADAGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDALPGKQMSIDADLRAN LLTPDEARRKRARLAVESQLYGGMDGAMKFVKGDAIAGLIITLVNMTAGIAVGVAYHDMTAGDAANRFSILSIGDAMVSQ IPSLLIAVSAGVMITRVSDESAKQGSSLGEDMLRQLGGNARAMLFAAVLLLGFAMVPGFPWELFLLLSALLGFAGYRLAR RGDGTSSAAPGKTVAALQRAGSKGDAPTILRHAPQFTSALGVRLAPDLADRLSATALNDAFETQRMLLQEQIGLPFPGIT MWTASDLAAGTFEILVLDVPSLTVTIPPGKVMVPGAATDPALAAQCEKAGAAAGQADSYWAPERQPPGGATVWRAEQVIA NDTIALLRARAKLFVGIQETQWVLEQLGAEFPGLVAEVQKALPLQRIADVLRRLLEENVPIRNARSIMESLVNWGPKEKD MLLLTEYVRGDLSRYIAYSATGGAASLQAVLFTSDLEQHIRQSIKQTPTGNYLALSPDEVRTLAERIGAYVGDVPHDEVA LVTSMDIRRYVRRMVEAHLPWLRVYSYQELGDYVELRPLGRVTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-118 | 43 |
| escV | AAC31514.1 | L0035 | Virulence | LEE | Protein | 6e-99 | 41 |
| escV | ACU09459.1 | EscV protein | Virulence | LEE | Protein | 6e-99 | 41 |
| escV | NP_290269.1 | hypothetical protein | Virulence | LEE | Protein | 9e-99 | 41 |
| ECs4569 | NP_312596.1 | hypothetical protein | Virulence | LEE | Protein | 9e-99 | 41 |
| escV | AAC38382.1 | EscV | Virulence | LEE | Protein | 2e-99 | 41 |
| escV | YP_003236089.1 | putative translocator EscV | Virulence | LEE | Protein | 4e-99 | 41 |
| escV | CAI43875.1 | EscV protein | Virulence | LEE | Protein | 3e-99 | 41 |
| escV | AAK26714.1 | EscV | Virulence | LEE | Protein | 3e-99 | 41 |
| escV | AAL57541.1 | EscV | Virulence | LEE | Protein | 3e-99 | 41 |
| escV | YP_003223476.1 | translocator EscV | Virulence | LEE | Protein | 5e-99 | 41 |
| escV | YP_003232152.1 | T3SS structure protein EscV | Virulence | LEE | Protein | 4e-99 | 41 |
| escV | CAC81861.1 | EscV protein | Virulence | LEE II | Protein | 6e-99 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bcenmc03_5931 | YP_001779542.1 | HrcV family type III secretion protein | VFG0064 | Protein | 2e-118 | 44 |
| Bcenmc03_5931 | YP_001779542.1 | HrcV family type III secretion protein | VFG0384 | Protein | 2e-117 | 44 |
| Bcenmc03_5931 | YP_001779542.1 | HrcV family type III secretion protein | VFG0198 | Protein | 5e-111 | 44 |
| Bcenmc03_5931 | YP_001779542.1 | HrcV family type III secretion protein | VFG0813 | Protein | 4e-99 | 41 |
| Bcenmc03_5931 | YP_001779542.1 | HrcV family type III secretion protein | VFG0729 | Protein | 1e-99 | 41 |
