Gene Information

Name : Bcenmc03_5894 (Bcenmc03_5894)
Accession : YP_001779505.1
Strain :
Genome accession: NC_010515
Putative virulence/resistance : Virulence
Product : lytic transglycosylase catalytic
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 3085651 - 3086136 bp
Length : 486 bp
Strand : +
Note : PFAM: Lytic transglycosylase catalytic; KEGG: bmu:Bmul_0064 lytic transglycosylase catalytic

DNA sequence : 
ATGAATCAACGTCATTCGGCGCCGCCACGGCAGCGCCACTGGGTACCGCGCGCCGCGCTGTGCGTGTGGCTGGCCTGCGC
CGGCACGGCCGCGCACGCCGATTGTTTCGAATCGGCCGCCGAGTATCACGGTGTCAACCCGATGATCCTGCGGGCCATCG
CGAACGTCGAGTCGCGTGGCAATCCGCAGGCGATCCACCGTAACAAGAACGGCACGACCGACATCGGCGAGCTGCAGATC
AATTCGATTCACTTGCGCGAACTGGCCGCCTTCGGGATTCGCGCCAAGGATCTGCTCGACGAATGCGTGAACGTCTACGT
GGCCGCGTGGCACCTGCGCAAGCAGATTGCCGCCTATGGCAATACCTGGGACGCCGTCGGCGCCTATCATTCGCGCAGCC
CGCGCCTGCGGGACGAATACGCACGGCTCGTGAAGGCGACGCTCGTGAAGTGGGGGGCGATGACGATCGACGGTGCGACG
CAATGA

Protein sequence : 
MNQRHSAPPRQRHWVPRAALCVWLACAGTAAHADCFESAAEYHGVNPMILRAIANVESRGNPQAIHRNKNGTTDIGELQI
NSIHLRELAAFGIRAKDLLDECVNVYVAAWHLRKQIAAYGNTWDAVGAYHSRSPRLRDEYARLVKATLVKWGAMTIDGAT
Q

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3001 YP_244069.1 Hpa2 protein Virulence Hrp PAI Protein 5e-30 60
hpa2 NP_636615.1 Hpa2 protein Virulence Hrp PAI Protein 5e-30 60
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 2e-29 59
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 8e-30 58
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 6e-30 58
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 2e-29 56
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 5e-14 45
unnamed AAK26704.1 unknown Not tested LEE Protein 4e-14 45
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 5e-14 45
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-14 45
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-14 45
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-14 45
unnamed AAL06358.1 unknown Not tested LEE Protein 3e-15 44
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 2e-13 43
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 4e-13 43
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 1e-13 43
unnamed AAC31524.1 L0045 Not tested LEE Protein 9e-14 43
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 1e-13 43
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 9e-14 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcenmc03_5894 YP_001779505.1 lytic transglycosylase catalytic VFG0823 Protein 4e-14 43
Bcenmc03_5894 YP_001779505.1 lytic transglycosylase catalytic VFG0719 Protein 2e-13 43
Bcenmc03_5894 YP_001779505.1 lytic transglycosylase catalytic VFG1789 Protein 2e-11 42