Gene Information

Name : Bcenmc03_5560 (Bcenmc03_5560)
Accession : YP_001779176.1
Strain :
Genome accession: NC_010515
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2703035 - 2704585 bp
Length : 1551 bp
Strand : -
Note : PFAM: transposase IS66; KEGG: bte:BTH_I3140 TnpC protein

DNA sequence : 
ATGTCCGCTGCTCCCACCGATCTCCCCGACGACATTGATGCGCTGAAGGCGATGGTCGCCAGTTTGCGCGAGCAGCTCTC
GTCGCGCGCGATCGAGATCGAACATCTGAAGCTGACGATCGCCAAGCTGCGCCGGATGCAGTTCGGCCGGAAATCGGAGA
AGCTGGATCGCCAGATCGAACAGCTTGAATTACGTCTGGAAGACCTGCAGGCCGACGAAGGTTCGGCCGATATGGCCACG
GCTGCAGCAGTGAAGCGGCCGAGTCGCGAAGGTGCGGGCCGCAAGCCGTTGCCGGATCACCTTGAGCGCGAAGAGCGCAT
CCATCTGCCAGCCGACGATGACTGCCCCGATTGCGGCGGGCAACTCAAGCCGCTGGGCGAAGACGTCGCGGAACAGCTCG
AATACGTGAGGGCGCACTTCCGCGTGATTCGTCACCGCCGTCCGAAGCTGGCCTGCGCGTGCTGCGATCGCATCGTGCAG
GCTGCGGCACCGAGTCGGCCGATCGACCGCGGCATCCCGGGACCGGCGCTGCTCGCACACATCGCCGTGTCGAAGTTCGC
GTACCACATCCCGTTGCACCGCCAGGCAGTTATGTACGCGCGTGAGGGCGTCGAGATCGATCCGGGCGCAATGGGGTATT
GGATGGGCAGTATCACGGCGCTGCTCGCACCGCTGGTCGACGCCGTGCGCCGCTACGCGCTGGCCGGCGGCAAGGTTCAT
GCGGACGACACGCCGCTGCCAGTGCTGGCGCCCGGCAACGGCCGCACGAAGACAGGACGTCTGTGGGTCTACGTGCGTGA
TGATCGGCCAAGTGCCTCCGAAGAGCCGGCGGCGGTCTGGTTCGCCTACACACCCGATCGACGGGGTGAGCATCCACAGC
AGCATCTTGCAGACTTCGCCGGCGTGCTGCAAGCCGATGCGTTTGCGGGCTATGCCGAGCTGTATCGCGGCGGCACCATC
CAGGAAGCTGCCTGCATGGCCCACGCTCGCCGAAAGATCCATGATCTACATGCCGTCCGTCCCAATGCGGTAACGGAGGA
AGTGCTGCACCGGATCGGCGCGCTCTACAAGATCGAGGAGCAGATCCGTGGCAAGCCACCTGATGAGCGGCACGGTGTGC
GCCAGGCGCGAGCGGTGCCGCTGCTCGACGACATGAAACGCTGGTTCGAAGCAACGCTCGCCACGCTCTCTGCAAAATCC
GACACGACCAAGGCGATTCGGTACGCGCTGAATCGCTGGCCGGCGCTCATCTACTACTGCAGCGACGGGCATGCGGAAAT
CGACAATCTGATCGCCGAGCGAGCACTGCGCGGTGTCGCCCTCGGCAGACGGAATTACTTGTTCGTCGGCGCTGACTCAG
GTGGCGAACGTGCCGCCGCGATGTATAGCCTGATCGGCACGGCACGCCTGAACGGCCTCGATCCCGAGGCGTATCTCGCC
TATGTGCTTGAGCGCATTGCTGACCATCCGATCAACCGCATCGACGAACTGCTGCCGTGGAACGTGGCGCCGTCGCTGCC
GTCTACTGCTCACGTCGAGCCCATCCGATAG

Protein sequence : 
MSAAPTDLPDDIDALKAMVASLREQLSSRAIEIEHLKLTIAKLRRMQFGRKSEKLDRQIEQLELRLEDLQADEGSADMAT
AAAVKRPSREGAGRKPLPDHLEREERIHLPADDDCPDCGGQLKPLGEDVAEQLEYVRAHFRVIRHRRPKLACACCDRIVQ
AAAPSRPIDRGIPGPALLAHIAVSKFAYHIPLHRQAVMYAREGVEIDPGAMGYWMGSITALLAPLVDAVRRYALAGGKVH
ADDTPLPVLAPGNGRTKTGRLWVYVRDDRPSASEEPAAVWFAYTPDRRGEHPQQHLADFAGVLQADAFAGYAELYRGGTI
QEAACMAHARRKIHDLHAVRPNAVTEEVLHRIGALYKIEEQIRGKPPDERHGVRQARAVPLLDDMKRWFEATLATLSAKS
DTTKAIRYALNRWPALIYYCSDGHAEIDNLIAERALRGVALGRRNYLFVGADSGGERAAAMYSLIGTARLNGLDPEAYLA
YVLERIADHPINRIDELLPWNVAPSLPSTAHVEPIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 0.0 89
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-109 60
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-126 56
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-135 56
tnp AEA34686.1 transposase Not tested Not named Protein 5e-135 55
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 2e-135 55
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-135 55
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-135 55
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-134 55
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-134 55
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 4e-135 55
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 4e-135 55
unnamed AAL57570.1 unknown Not tested LEE Protein 4e-135 55
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-134 55
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 1e-97 54
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 2e-114 52
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-128 52
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 5e-117 51
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 5e-117 51
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 7e-116 50
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 7e-116 50
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-106 48
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-79 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcenmc03_5560 YP_001779176.1 transposase IS66 VFG1700 Protein 4e-109 60
Bcenmc03_5560 YP_001779176.1 transposase IS66 VFG0793 Protein 2e-135 55
Bcenmc03_5560 YP_001779176.1 transposase IS66 VFG1513 Protein 7e-98 54
Bcenmc03_5560 YP_001779176.1 transposase IS66 VFG1736 Protein 2e-92 49
Bcenmc03_5560 YP_001779176.1 transposase IS66 VFG1051 Protein 7e-107 48