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Name : Bcenmc03_5428 (Bcenmc03_5428) Accession : YP_001779045.1 Strain : Genome accession: NC_010515 Putative virulence/resistance : Virulence Product : type III secretion FHIPEP protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 2553272 - 2555488 bp Length : 2217 bp Strand : + Note : PFAM: type III secretion FHIPEP protein; KEGG: bam:Bamb_4230 type III secretion FHIPEP protein DNA sequence : ATGGCTGAACCGAAGGCGCTCCCCCGCGACTGGCAGCGGTTGTTTTCCGCCGGCCGCGGCGTGTCCGGACGGCGCCTCGG GGGCGCATCGCCGCGCGCCGACCTGTTTCTCGCAACCTTCATCGTCGCGGTCGTCGCGCTGTTCATCCTGCCGCTGCCGC AGGCCGCGCTCGACGGGATGATCTCGTTGAATCTCGCGGCGAGCGTCGTGCTGCTGACGGTGTCGACCTACGTGCCGTCG GCGGTCAGCTTCTCGTCGTTTCCCGCGCTGCTGCTGTTTACGACGCTGTTCCGGCTCGCGCTGAACATCGCGTCGTGCAA GCTGATCCTGCTGCATGCGAACGCTGGCCACGTGATCGACGCGTTCGGGCGGCTGGTGGTCGGCAACAATGTGGTGGTGG GCGGCGTGGTGTTCCTCGTGATCGCGGTCGTGCAGTTCATCGTGATCGCGAAGGGGTCGGAGCGCGTGGCCGAAGTCGGC GCGCGCTTCTCGCTCGACGCGATGCCGGGCAAGCAGATGAGCATCGACGCGGACCTGCGCGCGGGCATCATCAGCGCCGA CGAGGCGCGCGAGCGGCGCGAGAAGCTCGAGCAGGAATCGCAGATGCACGGCGCGATGGACGGCGCGATGAAGTTCGTGA AGGGCGACGCGATCGCGGGCCTCGTGATCGCGTTCATCAACATCGTCGCGGGGATCGCGGTCGGCACGCTGATGCACGGG ATGGACATCGGCGAGGCGCTGCAGCGTTACGCGATCCTGACGGTCGGCGACGGGATGGCGTCGCAGATTCCGTCGCTGCT GGTATCGATCGCGGCCGGCATCGTGACCACGCGCGTCGCGACGCGCGATGCACGGCAGCGGCAGCTCGGCGAACAGCTCG GCGAGCAACTGGGCGCACACCCGCGCGCGCTGCTGATCGCGGCGTTCGTGCTGAGCGGTTTTCTCGTCGTGCCCGGTTTT CCGAAATGGTCGTTCGCGCTGATCGCGCTCGGCCTCGGCGCCTTCGCGTTCTCGCAACTGAAGCGCAAGACGTCCGCGCC GAGCTTCAACCTGATTCATGTCGCGGGGCGCGTCGGCGCGGCCGACGACGGCCAGCCCGCGAAGGTATCGCACGCGGCGG GCGTCACGTCGCTGATCGCGGTGTCGCTGTCCGACGACCTGCGCACGGGCCTGAACCTCGCGCAACTGCAGGCGGCGCTG TCGAGCGCGAAGGCACGCGTCGACGCGGACATCGGCACGGTATTCCCGCGCATCACGCTGAACGACGACGAGGGCGCGCC GGCCGGTACGTACCGGATCTATCTGCAGGACGTGCTCGTCGCGCACGGCGCGCTGAAGCCGGGCTGGCTGCTGTGGGACG GCGTCGCGCCGCTGCCGGAGCGCGCGGAGCGGCAGCCGGCCGAGGCGTTCGGCCCGTTCGCGACCGCGCTGTGGATCAAG CCCGACGGCGCGGCACCGGACGGCAAGTGGCTGTCGAGCGAGAGCGCGCTGGCCGCGCACGTCGAGCAGATCGTGCGCCA GCATGCGGACGAGCTGCTCGGCATCCAGGAGACGCAGGCGCTCGTGCATCTGGTGCGCCGCGATCATCCGGAGCTGGTGG GCGAACTGACGCGGCTCGTGCCGCTGCAGCGCGTGACCGAAGTGCTGCGCCGGCTGCTCGCCGAACAGGTGCCGATCCGC AACCTGCGCGTGATCTTCGAGAGCCTGATCACGTGGGCGCCGAACGAGCCTGACGACGTGATCGCGCTGGTCGAGCTCGT GCGCGTCGACCTGCGCCGGATGATCACCGATCGACACGCCGGCACGGCGCGCCAGCTGCGGGTCGTGCTGTTCGAGCAGA ACCTGCAGGAGCGGATCGAGAGCGCGGTGATGCGCACGAAGCAGGGCAATTTCCTCGCGCTGTCGAGCGCGGTCAAGCAG GACATCGGCGAACAGGTGCGCGCGATCGTGCAGGCAGCTCAGGCGGCCCCCGGCGGCCACGGCAACGCGCCTGGTGGCGC GCACGGTGGCGCGCGGCTCGCGGTGATGGTCGCGCTCGGCGCGCGCCGCTACGTGAAGACGATCCTGCAGCCGGTGCTGC CCGAACTCGCGGTGCTGTCGTACCAGGAAGTCGAGGAGGACGTGCAGTTGCATACGGTCGGCTGGGTGAAGAACCCGCCG GACGACGGCACGGTCGGCGCGGGCGCCGACGTGCGGGCGCCGGGAGCCGTGCAATGA Protein sequence : MAEPKALPRDWQRLFSAGRGVSGRRLGGASPRADLFLATFIVAVVALFILPLPQAALDGMISLNLAASVVLLTVSTYVPS AVSFSSFPALLLFTTLFRLALNIASCKLILLHANAGHVIDAFGRLVVGNNVVVGGVVFLVIAVVQFIVIAKGSERVAEVG ARFSLDAMPGKQMSIDADLRAGIISADEARERREKLEQESQMHGAMDGAMKFVKGDAIAGLVIAFINIVAGIAVGTLMHG MDIGEALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDARQRQLGEQLGEQLGAHPRALLIAAFVLSGFLVVPGF PKWSFALIALGLGAFAFSQLKRKTSAPSFNLIHVAGRVGAADDGQPAKVSHAAGVTSLIAVSLSDDLRTGLNLAQLQAAL SSAKARVDADIGTVFPRITLNDDEGAPAGTYRIYLQDVLVAHGALKPGWLLWDGVAPLPERAERQPAEAFGPFATALWIK PDGAAPDGKWLSSESALAAHVEQIVRQHADELLGIQETQALVHLVRRDHPELVGELTRLVPLQRVTEVLRRLLAEQVPIR NLRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHAGTARQLRVVLFEQNLQERIESAVMRTKQGNFLALSSAVKQ DIGEQVRAIVQAAQAAPGGHGNAPGGAHGGARLAVMVALGARRYVKTILQPVLPELAVLSYQEVEEDVQLHTVGWVKNPP DDGTVGAGADVRAPGAVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 1e-62 | 41 |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 3e-61 | 41 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 2e-62 | 41 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 6e-63 | 41 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 2e-62 | 41 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 6e-88 | 41 |
