Gene Information

Name : Bcenmc03_3406 (Bcenmc03_3406)
Accession : YP_001777049.1
Strain :
Genome accession: NC_010515
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 261037 - 262434 bp
Length : 1398 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: msm:MSMEG_2675 ISMsm8, transposase

DNA sequence :
ATGGGTCGAATTGCAGAATGGGTGTATCAGATAACCGGTCGAGGAGCGATGCACTCGCCAGGTGCGCCGTCGCTTCGGCA
TGAGATTGAGCGTCGATTTTGGAAGCAGATCGCCACCGGTGTTACGAGTGAGAGAGCCGCAGAGGCGGTTGGCGTGTCCT
CCGCGGTGGGCTCGCGCTGGTTCCGTTATCGTGGCGGTATGCCACTTTTCATGTCGAAACCTATATCTGGTAGGTACTTG
TCGTTCGCCGAGCGTGAAGAGATCGGGTTGCTCTCGGCCCAAAACATAGGGGTGCGCGAGATTGCTCGCCGAATCGGACG
TAGCCCGTCAACCATTTCGCGCGAACTTACGCGTAACGCAGCGACCCGTGGTGGCCGCCTCGAGTATCGTGCTTCGGTCG
CACAATGGAAGGCAGAGCACTTTGCCAAGCGACCCAAACCAGCGAAACTGGCGACTAACCAGCGACTGCATCATTATGTG
CAGGAGCGCTTGGAAGGCAAGGTGTGTGACGCTGATGGCCGTAAGATTGCCGGACCCCAGCAGGCACCGTTCAAGGGGCG
GAATAAACCGCATCGCGGAGACCGAAAGTGGGTCAATGGTTGGTCGCCGGAACAGATCGCCAACCGCCTACGGATCGATT
TCCCTGATGATGAATCCATGCGCATTTCTCACGAAGCCATTTACCAGGCTCTTTACATTCAAGGACGTGGCGCGCTCAAG
CGCGAGCTTGTGGGTTGTCTGCGCACCGGACGCGCGTTGCGCGTGCCAAGGGCCAGGGCGCGAGCCAAAGCATGGGCACA
CGTCAGCGAGGATGTGATGATCTCCAGTCGCCCCGCAGAGGTGGAAGATCGTGCTGTGCCGGGCCATTGGGAAGGCGACT
TGCTCATTGGCCTAAATCGATCTGCTATTGGCACGCTGGTGGAGAGATCATCCCGTTTCACCATGCTCGTACACTTGCCT
CGGGAGAAAGGTTACGGATTGATTCCCCGGACAAAGAACGGCCCTGCGCTGGCTGGCTACGGAGCTGTCACGATGGCCAA
TGCGCTCAAGAAGACGGTGACAGATATGCCGGCCCGGCTGTGGCGATCATTGACTTGGGATCGCGGCAAGGAGCTGTCCG
ATCATGCTCGCTTTACTGTCGAGTCCGGCGTACAAGTATTTTTCGCCGACCCGCACAGTCCATGGCAGCGTGGCACAAAC
GAGAATACGAACGGTCTATTGCGACAATACTTTCCAAAGGGCACAGACCTATCCCGATGGAGCGCACAAGAGATCCAAGC
CGTTGCGCATACACTGAATACTAGGCCTCGAAAGACGCTTGGATGGAAGACACCGGCAGAAGCTTTGAACGAGCATCTAA
AATCTGCTCAACAATCTCGTGTTGCGACGACCGGTTGA

Protein sequence :
MGRIAEWVYQITGRGAMHSPGAPSLRHEIERRFWKQIATGVTSERAAEAVGVSSAVGSRWFRYRGGMPLFMSKPISGRYL
SFAEREEIGLLSAQNIGVREIARRIGRSPSTISRELTRNAATRGGRLEYRASVAQWKAEHFAKRPKPAKLATNQRLHHYV
QERLEGKVCDADGRKIAGPQQAPFKGRNKPHRGDRKWVNGWSPEQIANRLRIDFPDDESMRISHEAIYQALYIQGRGALK
RELVGCLRTGRALRVPRARARAKAWAHVSEDVMISSRPAEVEDRAVPGHWEGDLLIGLNRSAIGTLVERSSRFTMLVHLP
REKGYGLIPRTKNGPALAGYGAVTMANALKKTVTDMPARLWRSLTWDRGKELSDHARFTVESGVQVFFADPHSPWQRGTN
ENTNGLLRQYFPKGTDLSRWSAQEIQAVAHTLNTRPRKTLGWKTPAEALNEHLKSAQQSRVATTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 1e-126 69
DIP0764 NP_939135.1 transposase Not tested Not named Protein 1e-129 68
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 7e-133 66