Gene Information

Name : Bcenmc03_5363 (Bcenmc03_5363)
Accession : YP_001778980.1
Strain :
Genome accession: NC_010515
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2488921 - 2489583 bp
Length : 663 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_B0768 two component transcriptional regulator, winged helix family

DNA sequence : 
ATGCGCGTACTGCTCGTCGAGGACGATCCGCTGATCGGCAGCGGGCTCGAACAGGGCCTCAAACAGGAAGGCTTCGCGGT
CGACTGGGTGAAGGACGGCGACGCCGCGTCGCTGGCGCTGCGCGCGACCGGCTACGGGCTGCTGCTGCTCGATCTCGGGC
TGCCGAACCGCGACGGTTTGTCCGTGCTCGCCGCGCTGCGCCGCCGCGACGAAAACCTGCCCGCGATCATCATCACCGCA
CGCGACGGCGTGCCCGACCGCATCGCCGGCCTCGACAGCGGCGCGGACGACTATCTCGTCAAGCCGTTCGAACTCGACGA
GCTGCTCGCCCGCATCCGCGCGGTCAACCGCCGCCATGCGGGCCGCGCGCAGACGACGCTCGCGATCGGCCCGCTGCGGC
TCGATCCCGTCAAGCACCTCGTCTGGCTCGACGACGACGAAGTGCCGCTGTCGCCGAAGGAATTCGTGCTGCTGCACGAG
CTGATGCGCGAACCGGGCGCGGTGATTTCGCGAGAGCAGTTCGAGGAACGGCTGTACAGCTGGGGCGAGGAAATCGAGAG
CAACGCGGTGCAGGTGCATATCCACAACCTGCGCAAGAAACTCGGCCACGACATGATCCGCACGGTGCGCGGCGTCGGCT
ACCGGATCGGTGACGGCACGTGA

Protein sequence : 
MRVLLVEDDPLIGSGLEQGLKQEGFAVDWVKDGDAASLALRATGYGLLLLDLGLPNRDGLSVLAALRRRDENLPAIIITA
RDGVPDRIAGLDSGADDYLVKPFELDELLARIRAVNRRHAGRAQTTLAIGPLRLDPVKHLVWLDDDEVPLSPKEFVLLHE
LMREPGAVISREQFEERLYSWGEEIESNAVQVHIHNLRKKLGHDMIRTVRGVGYRIGDGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-38 49
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcenmc03_5363 YP_001778980.1 two component transcriptional regulator BAC0487 Protein 5e-32 45
Bcenmc03_5363 YP_001778980.1 two component transcriptional regulator BAC0197 Protein 8e-28 42
Bcenmc03_5363 YP_001778980.1 two component transcriptional regulator BAC0083 Protein 2e-28 41
Bcenmc03_5363 YP_001778980.1 two component transcriptional regulator U82965.2.orf14.gene. Protein 3e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bcenmc03_5363 YP_001778980.1 two component transcriptional regulator VFG0473 Protein 2e-39 49
Bcenmc03_5363 YP_001778980.1 two component transcriptional regulator VFG0596 Protein 2e-24 41