Gene Information

Name : Xfasm12_0808 (Xfasm12_0808)
Accession : YP_001775426.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : 3.5.1.25
Position : 866994 - 868151 bp
Length : 1158 bp
Strand : +
Note : KEGG: xfa:XF1465 N-acetylglucosamine-6-phosphate deacetylase

DNA sequence : 
ATGGGTGCTTCTTCTGGAGTCGCCGGATTCATCAATGGCCGTGTCCTGACCGATACAGGGTTCCGTCATGATCTGGCGGT
GCTATTGCGTGGTGGATGCATTCAAGCACTGCTGCCGCATGATGATCCGCGGGTGACGGAGGGGGCGCAGTGGGTGGACT
TGCGGGGAGGTCTGTTGCTGCCTGGGTTTATCGATATTCAGGTGAATGGCGGCGGCGGCGTGCTGTTCAATAATGCGCGT
GATGTGGATGGCTTGGCCACAATTGCGCGTGCGCACCGTCGCTACGGGACGACGGGACTGTTACCCACATTGATTAGTGA
CACTGTGGAGGTGATGGCTGAGGCCATTGCTGCCACGCGTGCCGCGATTGCTCAGGGGGTACAGGGAATCCTCGGGATTC
ACTTGGAAGGCCCTTACCTCAATCCCCTGCGTAAAGGGATCCATGACCACACTCAGTTCCGTGTGCCGCAGTTGCATGAG
CTGATGCGGTGCACGGCATTGGATAACGGGGTGACTCTGGTGACGTTGGCGCCTGAGCAGGTGCCGGTTGAGATGATCCG
TGTTTTTGTCGAGCGTGGTGCGATCGTCTTTGCCGGGCATACGGCAGCGACGTATGAGCAAGTGCGGGCTGGCATCGCAG
CGGGTGTCACAGGGTTTACGCATCTGTACAACGCGATGTCGCAGTTAGTCGGGCGCGAGCCGAATGTGGTGGGTGCTGCG
CTGGAAGATCCGAATACATGGTGCGGGATCATCGTTGATGGCGTACACGTACATCCGGCGAGTCTGCGTGTGGCCTTAGC
CGCCAAGCCGCGCGGTAAGGTGCTGCTGGTGACCGATGCGATGCCACCAGTTGGCAGTGACAGTGTTCACTACGATCTCT
ATGGTGAAACGATTACGGTGATGGATGGTGTGGTCCGTAATGCGGCTGGTGCGTTGGCGGGTGCCGCGCTGGATATGGCA
ACGGCGGTGCGCAATACGGTGCATTGGTTGGGTGTTGATTTGGCTGAGGCTGTGCGCATGGCCTCGACCTATCCGGCGCA
GTGCATCGGGTTAGGGGATCGTCTGGGGAGGATTGCGCCTGGTTATCAAGCCGACCTGGTATGGGTTGACGACGACGTGC
AGGTACAGGGCACGTGGATTGCTGGTGTGGGCGCTTGA

Protein sequence : 
MGASSGVAGFINGRVLTDTGFRHDLAVLLRGGCIQALLPHDDPRVTEGAQWVDLRGGLLLPGFIDIQVNGGGGVLFNNAR
DVDGLATIARAHRRYGTTGLLPTLISDTVEVMAEAIAATRAAIAQGVQGILGIHLEGPYLNPLRKGIHDHTQFRVPQLHE
LMRCTALDNGVTLVTLAPEQVPVEMIRVFVERGAIVFAGHTAATYEQVRAGIAAGVTGFTHLYNAMSQLVGREPNVVGAA
LEDPNTWCGIIVDGVHVHPASLRVALAAKPRGKVLLVTDAMPPVGSDSVHYDLYGETITVMDGVVRNAAGALAGAALDMA
TAVRNTVHWLGVDLAEAVRMASTYPAQCIGLGDRLGRIAPGYQADLVWVDDDVQVQGTWIAGVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-54 42
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-54 42
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 5e-54 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xfasm12_0808 YP_001775426.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 2e-54 42