Gene Information

Name : Xfasm12_0761 (Xfasm12_0761)
Accession : YP_001775382.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Virulence
Product : arabinose-5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 818027 - 819064 bp
Length : 1038 bp
Strand : -
Note : KEGG: xft:PD0642 polysialic acid capsule expression protein

DNA sequence :
ATGGAGGTTCATTTTACTCCTGTACTGAACACATGTATGGCTGTCTCATCACTCCAGCACAATCACCTCAGCGATACAGC
GCTGATCGCAAGCGCAAGAAGGGTGATCGAGATTGAGCGTGAGGCGCTGACATTACTCAACGAACGGATAGGCGCACCAT
TTGTGGCAGCCTGTCGGCTGATTCTGAACTCGCACGGCCGCGTGATCAGCACTGGCATGGGCAAATCCGGACACATTGCA
CGCAAGATCGCCGCCACCTTGGCTTCAACGGGTACACCCGCATTTTTCGTACATCCCGGCGAAGCTGGGCATGGCGACCT
TGGAATGATCACGGACAGCGATGTGATCCTAGCGTTGTCCTACTCAGGTGAATCAGACGAAGTACGGATGCTGCTTCCAG
TCCTCAAGCGTCAAGGCAATCCAATCATTGCCATGACCGGCCGCCCCCAATCAACACTGGCACAGGCTGCCGATGTGCAT
CTGGATGTCAGTGTCACCACCGAAGCCTGCCCACTGGATCTAGCGCCAACCTCCAGCACAACCACTTCGCTAGTAGTTGG
CGACGCACTCGCAGTCGCACTATTGGATGCACGCGGCTTTACTGCGGAAGATTTTGCCCGCTCACACCCCGCTGGCCACC
TAGGTCGACGCCTACTACTGCACATTACGGACGTGATGCACAGTGGTGATGACCTGCCAGCAGTACATGAGGAAGCCACA
CTGAGCGAGGCATTACTCGAGATGACTCGTAAACGTCTGGGCATGACTGCAATCGTTGACAACGAGGGCCGACTCCAGGG
AGTGTTCACTGACGGCGACTTGCGCCGTGCTCTGGACAGCAACATTGATGTAAGAAACGCGCGCATCAACGAAGTCATGA
CCCGCCATCCCAAAACAATCAATGCCGACCAACTCGCGGCCGAAGCTGCACGATTGATGGAAGCCAATAAGATCAATGGT
TTGATTGTGGTCGATCCGCAACAGCGCGCGGTAGGCGCCCTGAACATTCACGACCTGCTGCACGCCAAAATTGTTTAA

Protein sequence :
MEVHFTPVLNTCMAVSSLQHNHLSDTALIASARRVIEIEREALTLLNERIGAPFVAACRLILNSHGRVISTGMGKSGHIA
RKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQGNPIIAMTGRPQSTLAQAADVH
LDVSVTTEACPLDLAPTSSTTTSLVVGDALAVALLDARGFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEAT
LSEALLEMTRKRLGMTAIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKING
LIVVDPQQRAVGALNIHDLLHAKIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 2e-53 44
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-53 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 2e-53 43