Gene Information

Name : Xfasm12_0427 (Xfasm12_0427)
Accession : YP_001775071.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG0553
EC number : -
Position : 476105 - 477523 bp
Length : 1419 bp
Strand : +
Note : KEGG: xft:PD1194 hypothetical protein

DNA sequence :
ATGAACCTGCGCCCCTACCAACACACCATCGTTGATTTCATCCTGACGCACCCACGCTGCAATCTATTCGTGCCAATGGG
TTTAGGAAAGACGGTGGCAACGCTGACGGCGTTAGATGTGCTCCTGGTGGTCGAAGACATTGCGCCTATTTTGGTGATTG
CTCCGCTGCGCGTTGCTGCCACGACATGGCCGGATGAGGTGGCCAAGTTCCCCCATTTGCGCCATCTGCGGGTGTCCGTG
GTCGTGGGTAGTGCGGCGGCACGTCGCCACGCCTTGGAGCAGGACGCGGATATCTACTGCATTAATTACGACAATCTGAA
ATGGTTAGTAGAGTTTTATCAGGACCGTTGGCCGTTCCGTATGGTGGTCGCCGATGAGTGCTCCAAGCTGAAAGGGTTCC
GACTGCGGCAAGGAACACGGCGGGCCCGCGCACTGGCCAAGCATGTGCATACCAAGGTGGAGCGCTACATTGGGTTGACC
GGCACGCCCGCGCCGAATAGGCTACAGGACCTGTGGGCGTTGATGTGGATGGTGGATCGTGGGGCACGGCTTGGGACTCA
TTTCAAAGCGTTTAGCGATCGCTGGTTCCGTGCGGTGCAGATCGGCAGTGATCCGCATGCGGTGCGCCTTGTGCCCGCGC
CAAATGCATCTCAAGAGATTCAAGACAAGATACGCGACCTCTGTTTATCACTTGATCCACATGCGTATTTCGATTTACGC
CAGCCGATTGTCAATACGATTCGCGTTGCGTTGCCAGAACATGCGCAACGTCTGTACAAGGCCATGGAACAAGACATGTT
CATCGCCTTGGAATGCGGTGCCGAAGTAGAAGCCTTTAACGCCGCCAGTAAAACCATAAAATGCCTGCAACTGGCCAATG
GTGCGCTGTATACCGATGACACACGCCAGGCTTGGGAAGTCGTCCACGACGCAAAACTAGAGGCGCTGCACGACATTATC
GAAGAAGCCGCCGGTATGCCGGTGTTGGTGGCGTATCACTTTAAAAGTGATGTAGCACGGTTGCAGCGTGCCTTCCCCAA
GGGACGTGCTTTGGACAAAAACCCCGACACGATCCGCGATTGGAATGCGGGGAACATTCCCGTGCTATTTGCCCATCCGG
CCAGTGCCGGTCATGGCTTAAATCTGCAAGACGGCGGAAATATTTTGGCCTTCTTCGGCCACTGGTGGGACCTGGAGCAG
TACCAGCAGATCATCGAACGCATCGGACCGACACGTCAGGCGCAAGCCGGACATACGCGGCCTGTATTTATTCACCACAT
CGTGGCGGCGGGCACGGTGGATGAATTGGTGATGGCCCGCCGTGAATCCAAACGCGAAGTACAGGACCTGCTGCTGGAAG
CGGTGAAACGCAGAGAAACAGGCAAACCACTCACATCACAAGGAGCCATGACGCGATGA

Protein sequence :
MNLRPYQHTIVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPILVIAPLRVAATTWPDEVAKFPHLRHLRVSV
VVGSAAARRHALEQDADIYCINYDNLKWLVEFYQDRWPFRMVVADECSKLKGFRLRQGTRRARALAKHVHTKVERYIGLT
GTPAPNRLQDLWALMWMVDRGARLGTHFKAFSDRWFRAVQIGSDPHAVRLVPAPNASQEIQDKIRDLCLSLDPHAYFDLR
QPIVNTIRVALPEHAQRLYKAMEQDMFIALECGAEVEAFNAASKTIKCLQLANGALYTDDTRQAWEVVHDAKLEALHDII
EEAAGMPVLVAYHFKSDVARLQRAFPKGRALDKNPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHTRPVFIHHIVAAGTVDELVMARRESKREVQDLLLEAVKRRETGKPLTSQGAMTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH1779 YP_253694.1 hypothetical protein Not tested ¥ÕSh1 Protein 5e-65 42
SEQ_2070 YP_002747285.1 SNF2 family phage protein Not tested ¥ÕSeq4 Protein 5e-63 41
MW1405 NP_646222.1 hypothetical protein Not tested ¥ÕSa2 Protein 9e-68 41
SAOV_0314 YP_005735831.1 putative DNA helicase Not tested ¥ÕSa1 Protein 2e-67 41
SAUSA300_1408 YP_494105.1 phage helicase Not tested ¥ÕSa2 Protein 5e-64 41