Gene Information

Name : Xfasm12_0385 (Xfasm12_0385)
Accession : YP_001775029.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 442276 - 442998 bp
Length : 723 bp
Strand : +
Note : KEGG: xft:PD0357 ABC transporter ATP-binding protein

DNA sequence : 
ATGAATGAGCGCAGTACTCCGCAGGCATTGACTGGCCCGGTGATTCGAGCCGAGTGCCTTGGAAAAACCTATTCTGAGGG
TAAGTTACTGACCCAAGTGTTTGATGGGCTGGATTTGCAAGTTATGCGTGGCGAGACGGTGGCGATTGTTGGTGCCTCTG
GTGCTGGTAAAAGCACGCTGCTGCATTTACTGGGCGGACTCGACGTTCCGACTGCCGGTGAAGTGTACGTCGCTGGGCAA
CGTATGTCGGCCTTGTCTGATGGGGATCGTGGTCGCTTACGTAACAAAACATTGGGGTTTATCTACCAGTTCCATCACTT
GTTGCCGGAATTTACTGCATTGGAGAATGTGATGATGCCGGTGTTGTTGTCTGGTCAGAGTGTATGCAGCGCGCAGATGC
GCGCACAGATGTTGTTGGAAGCGGTCGAATTGGGGCATCGTCTGAATCACAAGCCAAGTGAGCTATCCGGGGGTGAACGG
CAACGTGCTGCGGTTGCGCGGGCTTTGGCCAATTCTCCTGATTGTGTGTTTGGCGACGAGCCAACCGGAAACCTCGACAA
TCGTACCGCCAGCACGGTGTTTGAATTGATGCTCGAACTCAATCGTGCGCAGCGAACCAGTTTGGTACTGGTGACACATG
ATCGCGGCTTGGCAAGATGCCTGGATCGGGTACTGGAGTTGTATCAAGGTGGTTTGCGCGAATTGACCTCAGCAGAAGTC
TGA

Protein sequence : 
MNERSTPQALTGPVIRAECLGKTYSEGKLLTQVFDGLDLQVMRGETVAIVGASGAGKSTLLHLLGGLDVPTAGEVYVAGQ
RMSALSDGDRGRLRNKTLGFIYQFHHLLPEFTALENVMMPVLLSGQSVCSAQMRAQMLLEAVELGHRLNHKPSELSGGER
QRAAVARALANSPDCVFGDEPTGNLDNRTASTVFELMLELNRAQRTSLVLVTHDRGLARCLDRVLELYQGGLRELTSAEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-27 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Xfasm12_0385 YP_001775029.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-37 42