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Name : Xfasm12_2283 (Xfasm12_2283) Accession : YP_001776760.1 Strain : Xylella fastidiosa M12 Genome accession: NC_010513 Putative virulence/resistance : Unknown Product : Type I site-specific deoxyribonuclease Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 2427594 - 2430728 bp Length : 3135 bp Strand : - Note : KEGG: xfa:XF2739 type I restriction-modification system endonuclease DNA sequence : ATGGCATTTTTATCAGAAGCCACCTTGGAACAAGCCGTGCTGGATCAGCTACGCCTATTGGGCTACAGCATCGAGCGTGA AGAAAACATCGGCCCTGATGGCTATCGTCCGGAACGCGCCAGTTATGACCAGGTTGTACTCAAACAACGCTTCGTTGATG CCGTTACACGTCTCAACCCAGGGCTGCCGCCAGAGGCCAGACAGGATGCAATCCGTAAGGTCACACAGTCTGAGTTGCCA TCATTACTCGAAGAAAACCGCCGCATCCACAGACTGATCACCGAAGGTGTCGATGTCGAATACTATGCCCAGGACGGTAC CCTGACAGCGGGCAACGTTGCACTCATCGACTTCGACCACCCCCAACAGAACGATTGGTTGGCCGTGAACCAGTTCGTGG TTATTGCTGATCACTACAACCGGCGTCCTGACGTGGTCCTCTTCTTGAACGGCTTGCCATTGGCCGTGATCGAATTGAAG GCACCAGGAAGTATCAATGCAACCTTGATTGCAGCCTTCAATCAGTTGCAGACCTATAAAGAGCAGATCCCGGCACTGTT CAACACCAATGCCCTGCTAGTGACTTCTGACGGGATGACGGCCCGCTTCGGCTCGCTGTCGGCCGACTTAGAACGCTTCA TGCCTTGGCGCACCACCGACGGCACCGACATTGCTCCAAAGGGGGTGCCGGAACTTGCAACACTGATTGAGGGGATATTC GAGCCGCATCGCCTGCTCGACCTACTGCGCCATTTCACCGTTTTCCGGAAGACGGATGCTGGCTTGGCGAAGATCATCGC CGGTTACCACCAATTCCACGCTGTACGGCAGGCCATCAATAGCACCGTGGCTGCTTCCTCGCCCCAGGGGAATCAACAGA TTGGTGTCATCTGGCACACCCAAGGTTCCGGAAAAAGCCTACTGATGGCTTTCTATGCTGGACAACTGGTCAAACACCCC GCAATGGCCAACCCAACGCTTGTTGTACTCACAGATCGTAACGATCTTGACGATCAGTTATTCACCACATTCTCACAGTG CGGTGATTTAATCCGGCAAACCCCGGTACAGGCCCAGAGCCGCGACCAGGTGCGGAAACTCTTGAACCGTGCATCCGGCG GAGTGATTTTTACCACCTTGCAGAAATTCGGTGACATCACAGAACCACTGACCACACGACGTAACGTCGTCGTCATCGCT GATGAAGCACACCGCAGCCAATATGGCTTCAAAGCCAAAGTGGACAACAAAACCGGCAAAATCTCCTATGGCTTCGCTAA GTACATGCGTGATGCCCTGCCCAACGCATCTTGCATCGGTTTTACCGGCACACCGATTGAGGCCGACGACGTCAATACCC CAGCCGTATTCGGCAACTACATCGACATCTACGACATCAGCCGTGCGGTCGAAGATGGTGCGACCGTGCCGATCTACTAC GAATCGCGGCTGGCACGTATTGCACTGGATGAAGCCGAGAAACCGCAGATTGATGCTGAAGTCAACGCACTGACCGAAGC CGATTCCGAGGCCGAGCAAGAGCGCTTCAAGAAAAAATGGTCAACGGTCGAAACCTTAGTCGGCAGTGATAAACGGCTTG CTTTAATCGCCAAGGACATCATCACCCATTGTGAAGATCGCCTAGCCGCTCTGGATGGGAAGGCGATGGTGGTCTGTATG AGCCGTCGTATCTGTGTCGCCCTATACGATCACATCGTGACACTGCGGCCCGATTGGCACAGCACCGATAACAAGGCCGG ATCGCTCAAAATCGTCATGACCGGCACGGCCAGTGATCCGCAGCAGTGGCGACAGCATATCGGCAACAAAGCCCGGCGTG ATCTGCTGGCCGAACGTGCCCGTGACCCCAAAGACCCACTCAAACTAGTGATTGTCCGGGATATGTGGCTCACTGGTTTT GACGCCCCCTGCATGCACACCATGTACCTTGACAAGCCGATGCAAGGGCATGGATTGATGCAGGCCATTGCACGGGTGAA CCGCGTGTTCCGCGACAAACCCGCCGGATTGATCGTGGACTACATCGGCATCGCACAAAATCTCAGAACGGCCCTGCAAC AGTATTCGAAGAACGATCAGCAACACACCGGTGTTGATGAAGCACAGGCCATTGCAGTCATGATGGAGAAATACCAGATC GTCCGGGATATGTACCACGGCTACGATTACCTCACCGCAATGAGTGGTACCCCACAAGAGCGCCTTGCCATGATGGGGGG AGCCATTGAGTGGATACTCAATCTTCAGCAGCAACTGGCAGCCACAGCACAGACCAAAGAAGGCAAAAAAGAGGCCCACC GCCGCTATCAAGATGCTGTGTTAGCGTTGTCTAAGGCGTTCGCCCTGGCATCGGCCTCCGATGAGGCCCGCCACATCCGT GAAGAAGTCGGCTTCTTCCAGGCGATCCGTGCCGCCCTCGTCAAGAGCGCCGATCATTCCGGGGGTAGCGAACCGCAACG CGACCTGGCCATCCAGCAGATCGTGAGCCGAGCCGTCGTCTCGACGGAGATCGTCGATATCCTGGCTGCTTCTGGAATCA ACAGCCCAGATATTTCCATCCTGTCCGACGCATTTCTGGCTGAAATTCAGCAGATGCAACGAAAACACCTCGCCTTGGAA GCCTTGCGCAAGCTGTTGAACGACCGCATTCGTTCCCGCAGCACCGCTAACCTCGTGCAGACCAAGGCCTTCTCCGAGCG CCTGGAAGGTGCTGTGGCGCGCTACCACGCCAACGCGATCACCACTGCCCAGGTGCTCCAGGAACTGATCCAATTGGCCA AAGACATCCGTGCTGCTCGCCAGCGCGGCGAAGCCACCGGATTGTCTGATGAAGAGGTTGCCTTCTACGACGCACTGGCC GAAAACGAAAGCGCTGTACAGATGATGGGAGATCACACACTCCGGCTGATCGCTCACGAATTACTCATGCGCCTGCGCGA AAACGTCTCAGTGGATTGGGCCCATCGTGACTCCGCCCGTGCCCGGATGCGTGTCCTAGTGAAGCGCATCCTGCGCAAGT ACGGCTACCCGCCTGATCTACAGAACACGGCTGTGCAGACCGTCCTCCAGCAGGCCGAAGCCTTCTCGTCCCAGTGGAGT GATTCTGGACCCTAA Protein sequence : MAFLSEATLEQAVLDQLRLLGYSIEREENIGPDGYRPERASYDQVVLKQRFVDAVTRLNPGLPPEARQDAIRKVTQSELP SLLEENRRIHRLITEGVDVEYYAQDGTLTAGNVALIDFDHPQQNDWLAVNQFVVIADHYNRRPDVVLFLNGLPLAVIELK APGSINATLIAAFNQLQTYKEQIPALFNTNALLVTSDGMTARFGSLSADLERFMPWRTTDGTDIAPKGVPELATLIEGIF EPHRLLDLLRHFTVFRKTDAGLAKIIAGYHQFHAVRQAINSTVAASSPQGNQQIGVIWHTQGSGKSLLMAFYAGQLVKHP AMANPTLVVLTDRNDLDDQLFTTFSQCGDLIRQTPVQAQSRDQVRKLLNRASGGVIFTTLQKFGDITEPLTTRRNVVVIA DEAHRSQYGFKAKVDNKTGKISYGFAKYMRDALPNASCIGFTGTPIEADDVNTPAVFGNYIDIYDISRAVEDGATVPIYY ESRLARIALDEAEKPQIDAEVNALTEADSEAEQERFKKKWSTVETLVGSDKRLALIAKDIITHCEDRLAALDGKAMVVCM SRRICVALYDHIVTLRPDWHSTDNKAGSLKIVMTGTASDPQQWRQHIGNKARRDLLAERARDPKDPLKLVIVRDMWLTGF DAPCMHTMYLDKPMQGHGLMQAIARVNRVFRDKPAGLIVDYIGIAQNLRTALQQYSKNDQQHTGVDEAQAIAVMMEKYQI VRDMYHGYDYLTAMSGTPQERLAMMGGAIEWILNLQQQLAATAQTKEGKKEAHRRYQDAVLALSKAFALASASDEARHIR EEVGFFQAIRAALVKSADHSGGSEPQRDLAIQQIVSRAVVSTEIVDILAASGINSPDISILSDAFLAEIQQMQRKHLALE ALRKLLNDRIRSRSTANLVQTKAFSERLEGAVARYHANAITTAQVLQELIQLAKDIRAARQRGEATGLSDEEVAFYDALA ENESAVQMMGDHTLRLIAHELLMRLRENVSVDWAHRDSARARMRVLVKRILRKYGYPPDLQNTAVQTVLQQAEAFSSQWS DSGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
