Gene Information

Name : Xfasm12_1908 (Xfasm12_1908)
Accession : YP_001776415.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Unknown
Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1987975 - 1989069 bp
Length : 1095 bp
Strand : -
Note : KEGG: xft:PD1747 riboflavin-specific deaminase

DNA sequence :
ATGAGCGCATTTTCCGCGGATGATCACTGTCACATGGAACGGGCCTTGTGTTTGGCTGAGCGTGGCGCTTACACGACGCG
TCCTAACCCAATGGTGGGTTGTGTGATTGTGCATGATGGTGAAGTAGTGGGAGAGGGTTGGCACCAGCGTGCTGGCGATC
CGCATGCTGAGGTATTTGCATTGCGTGCGGCTGGAGACTGCGCACGAGGTGCAACAGCTTACGTTACGTTGGAGCCGTGT
GCGCACTCGGGGCGCACTCCGCCGTGTGCGATGGCGTTGATTGATGCCGGAGTGAGACGGGTGGTGGCGGCGATGGTCGA
TCCATTTCCGTTAGTCAATGGTGGGGGAGTCACTCTGTTACGTGCGGCTGGGGTGACGGTTGAGCATGGTTTGATGGAGG
CGCAGGCGCGCGCACTTAACCGTGGCTTTCTGTCGCGGGTGGAGCGTGGTCGGCCATGGGTGCGGATCAAGCTTGGTAGC
AGTTTGGATGGGCGTACCGCGTTGGCTAGTGGCGAATCCAAGTGGATTACCGGGGAGGCGGCACGTGCTGATGTGCAGCG
TTGGCGCGCGCGCGCTAGCGCGATTTTGACGGGGGCTGGGACGGTGCTTGCCGATGATCCGGCGTTAACGGTGCGCCTGG
GTGGGGAGGAGGGAGCGTTTTTGCCGCCGTTGCGGGTGGTGCTTGATTCTAGGTTGCGTTCACTTAGTTGCGTGAAGGTG
CGTGACGGTACTGCACCAACGTTGTATCTGCATGGTTTTGGGGTCACGTCCCCGGTGTTGCAACACGTCGATTTTTCCGA
GGTTCAGCAACGTGATGCTGGGCTTGATCTGGGGGCTGTGTTACGCCTGTTGGGTGAGCGTGGCATCAATGAGGTTCAGG
TTGAGGCTGGGGCGACGTTATGCGGGGCGTTGCTGCACGCCGGGTTGGTGGATGAGTTACTGATTTATATTGCACCGTTG
TTGCTGGGTGATACGGCACGGCCATTACTGGCTGGATTGGATATCGGGCGCATGGATCAGTGCATTGGTTTGAAGGTGCT
GGAGGTCGCTCAGGTCGGCAACGATCTGCGATTGTTATTACGTCCGTGTGGTTGA

Protein sequence :
MSAFSADDHCHMERALCLAERGAYTTRPNPMVGCVIVHDGEVVGEGWHQRAGDPHAEVFALRAAGDCARGATAYVTLEPC
AHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGVTLLRAAGVTVEHGLMEAQARALNRGFLSRVERGRPWVRIKLGS
SLDGRTALASGESKWITGEAARADVQRWRARASAILTGAGTVLADDPALTVRLGGEEGAFLPPLRVVLDSRLRSLSCVKV
RDGTAPTLYLHGFGVTSPVLQHVDFSEVQQRDAGLDLGAVLRLLGERGINEVQVEAGATLCGALLHAGLVDELLIYIAPL
LLGDTARPLLAGLDIGRMDQCIGLKVLEVAQVGNDLRLLLRPCG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-62 50
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-62 50