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Name : Xfasm12_1477 (Xfasm12_1477) Accession : YP_001776024.1 Strain : Xylella fastidiosa M12 Genome accession: NC_010513 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1546938 - 1548218 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATCCGACTCTACTCCGTCAACAGCTTGCGAAACTCGCTGAATGCTTGTTGACTGTACGCGGTTTCACTCTTGA TGTTGCAGCCCTTGAAGCATTGGAAAGCGAACGTAAACGTATCCAGGTGCATACCCAAGAGTTGCAATCCCTGCGTAACA GTAAATCCAAGGCGATTGGCCAAGCCAGGAGCAAGGGTGAAGATGTGTCTGCGTTAATGGCTGAGGTTGCCGCTTTTAGT GATGATTTAAAAGCCTCGGAGATAGCGTTGGAGGAGATCCGTACTGAATTAGAGAAAGTGGCCTTGGATATTCCCAATTT GCCGCAGCAAGATGTGCCGCTGGGTGCCGATGAACGTGAAAATGTAGAGCAGGCCCGTTGGGGAGTGCCACGTACGTTTG ATTTTGCCATCAAGGATCATGTTGAATTGGGTGCGTGTCATGGTTGGTTAGATGCCGAGAGTGCTGCCAAGCTATCCGGT GCGCGTTTCACTGTATTGCGTGGCCCCATCGCACGGCTGCATCGCGCACTGGCGCAGTGCATGCTTGACTTACATGTTAG CCAGCATGGATACGAAGAAGTCAATGTCCCAATCATTGTCAATGCCGACAGCTTACATGGGACTGGTCAATTACCGAAAT TTGAAGAGGACATGTTCAGTACTCAGCTCGGTGAGCATCGGCGCTATTTGATTTCGACCTCTGAAATTTCACTGACTAAT TTAGTACGTAACGAGATTATTGAGGCGGATCGCCTGCCGTTGCGTATGGTTGCACACTCATTGTGTTTCCGTTCCGAGGC AGGCAGCGGTGGTCGTGATACGCGTGGCATGATTCGTCAGCACCAGTTTGAGAAGGTCGAATTGGTCAGCGTGTGTAAAC CGCAAGAGAGTGAAGGTGAGCACCATCGTATGACTCGCTGCGCAGAGACAGTGTTGGAAATGCTGGGACTGCCCTACCGC AAGATCCTGCTGTGTACCGGTGATATGGGATTTGCTGCGACCAAAACCTACGACTTGGAAGTTTGGCTGCCGTCGCAGGG AATGTATCGCGAGATTTCATCGTGTTCCAATTGCGGTGATTTCCAAGCCAGACGCATGCAAGCCCGTTGGCGCAATTCTG TCACCGGCAAGCCGGAATTGGTACACACACTCAACGGTTCTGGTGTCGCTGTTGGCCGTGCAATGATTGCGGTGATGGAG AACTATCAGAATGCTGATGGTTCGATTACGGTGCCGGAGGTGTTGCGTCCTTACATGGATGGTTTGAGTCGGATTGGTTG A Protein sequence : MLDPTLLRQQLAKLAECLLTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIGQARSKGEDVSALMAEVAAFS DDLKASEIALEEIRTELEKVALDIPNLPQQDVPLGADERENVEQARWGVPRTFDFAIKDHVELGACHGWLDAESAAKLSG ARFTVLRGPIARLHRALAQCMLDLHVSQHGYEEVNVPIIVNADSLHGTGQLPKFEEDMFSTQLGEHRRYLISTSEISLTN LVRNEIIEADRLPLRMVAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQESEGEHHRMTRCAETVLEMLGLPYR KILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNCGDFQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVME NYQNADGSITVPEVLRPYMDGLSRIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-93 | 50 |
