Gene Information

Name : actP (Xfasm12_1449)
Accession : YP_001776001.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Resistance
Product : acetate permease
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 1513946 - 1515670 bp
Length : 1725 bp
Strand : -
Note : member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake

DNA sequence :
ATGAACATAGGCAGGCATCTTTTGTTGGTGTTGTTTGGGTGGTTGCCGGTGAGATTGGGGTTTGCTGCAGATGCGATAAG
TGTCGTCGATAAGCAGCCGGTAAATTGGGTGGCGATCACCATGTTCGCTGTTTTTGTGCTGATTACGTTATGGATCACTC
AGTGGGCCGCGAAGAAGACGCGATCATCTGCGGACTTTTATACGGCTGGGGGGACAGTCACCGGTTTCCAAAATGGTTTA
GCGATGGCGGGTGATTACATGTCTGCTGCTGCGTTTCTTGGCATTACCTCGGCGGTGATGATCAGTGGGTATGATGGAAT
GCTCTATGCGATTGGCTCTTTAGTCGGTTGGCCGGTTCTGGTTTTTCTAGTCGCTGAGCGACTGCGTAATCTTGGTAAAT
ATACTTTTTCTGATGTGGTGGCTTACCGTTTCGCGGCGGTGCCAGTTCGGTTGTTCACTTCTGCGAGTACGCTGGTGGTG
GTGGTGTGTTCCCTAGTTGCACAAATGGTTGGGGCCGGTGCGCTTATTAAGTTGCTATTTGGTTTGGATTATTGGGTTGC
AGTGATTTTTGTTGGTGGACTGATGATGGTGTATGTGATGTTTGGTGGGATGGCTGCGGCCACTTGGGTACAGATTATTA
AGGCGGTGTTGCTGTTGACTTGTTTGACTTTCATGGCAGTCATGATCATGTGGAGGTTCGGTTTTAATTTTGAGGGCTTG
TTTGCGAGTGCGGTGGAGGTCAAGACTCAAATTGCGATGGCGGGCGGTAAATCTGGGGAGGATGCTAAAGCGTTAGGGCT
ATCGATCATGGCGCCGGGTAGTTTTATCAAGGATCCAATTTCGGCGATTTCATTGGGCATCGCATTGGTATTCGGTACTG
CGGGGTTACCACATATTTTAATGCGTTTCTTCACCGTGCCTGACGCCAGACAGGCGCGTCATTCGGTGTTGTGGGCGATT
ACCTGGATCGGTTATTGCTACATCTTGATGTTTATCATTGGATTCGGTGCGATTGTGCTTGTGTTAGCGAATCCGCAGTA
TGCCGATATCGCTTCTGGCACCATCCGCGGTGGTCAGGGTGCAGCCAATATGGCTGCGGTGCTTGTCGCCAAAGTAGTCG
GGGGTAATGTGTTCATGGGGTTTGTCTCTGCTGTGGCATTTGCGACGATTCTGGCGGTGGTAGCAGGGTTGGCGTTGTCT
GGTGCATCGGCGGTGTCACATGATGTGTATGCGATGGTGATTAAGCAGGGTAAGCCATCTTCGGATACTGAGTTGTTGGT
CTCGCGTGTGACCACGGCAGTATTGGGTGTGGTTGCGGTGTTGCTGGGGATCGTGTTTCAGAAGCAGAATGTTGCGTTCA
TGGTGTCATTAGCATTTGCGATTGCAGCGTCGGCTAATTTCCCTGTACTGGTTCTGTCGCTGTTTTGGAAGAATTGTACG
ACGTGGGGTGCGGTGATCGGTGGTTTTCTCGGTTTGATTTCTTCGTTGGTGTTGACGGTGTTATCACCTTCGGTGTGGGT
CGATACGTTGGGTCATTCGGTAGATTCGGTGCGATTCCCTTACACGTCGCCGGCATTGTTTTCCATGACCATAGGATTTG
TCGGTATTTGGTTGTTTTCGGTGCTGGATCGTAGTGGCCGGGCGGCGAAGGAGCGCATTGCGTTTAAGGCGCAGCAGGTA
CGTGCTGAAACTGGATTAGGTGCTTCCAAAATGTCACCCAATTGA

Protein sequence :
MNIGRHLLLVLFGWLPVRLGFAADAISVVDKQPVNWVAITMFAVFVLITLWITQWAAKKTRSSADFYTAGGTVTGFQNGL
AMAGDYMSAAAFLGITSAVMISGYDGMLYAIGSLVGWPVLVFLVAERLRNLGKYTFSDVVAYRFAAVPVRLFTSASTLVV
VVCSLVAQMVGAGALIKLLFGLDYWVAVIFVGGLMMVYVMFGGMAAATWVQIIKAVLLLTCLTFMAVMIMWRFGFNFEGL
FASAVEVKTQIAMAGGKSGEDAKALGLSIMAPGSFIKDPISAISLGIALVFGTAGLPHILMRFFTVPDARQARHSVLWAI
TWIGYCYILMFIIGFGAIVLVLANPQYADIASGTIRGGQGAANMAAVLVAKVVGGNVFMGFVSAVAFATILAVVAGLALS
GASAVSHDVYAMVIKQGKPSSDTELLVSRVTTAVLGVVAVLLGIVFQKQNVAFMVSLAFAIAASANFPVLVLSLFWKNCT
TWGAVIGGFLGLISSLVLTVLSPSVWVDTLGHSVDSVRFPYTSPALFSMTIGFVGIWLFSVLDRSGRAAKERIAFKAQQV
RAETGLGASKMSPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 7e-104 54
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 4e-68 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
actP YP_001776001.1 acetate permease BAC0564 Protein 7e-130 58
actP YP_001776001.1 acetate permease BAC0570 Protein 1e-109 55