Gene Information

Name : Xfasm12_1368 (Xfasm12_1368)
Accession : YP_001775928.1
Strain : Xylella fastidiosa M12
Genome accession: NC_010513
Putative virulence/resistance : Unknown
Product : transcription-like protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1423279 - 1425597 bp
Length : 2319 bp
Strand : +
Note : KEGG: xft:PD1223 transcription-related protein

DNA sequence :
ATGCAAAACAGCCTCCTCACCCAGCATATTGCTCAGATCATTGCCACTGAGATCTCCTCACAGCCCACCCAAGCCCGCGC
AGCCATCGCCTTGCTTGATGAGGGCGCAAGCGTCCCCTTCATCGCACGCTACCGTAAAGAAGCCACCGGCGGCCTGGATG
ACACCCAATTACGCACCCTCGAAACCCGATTAACCTACCTACGCGAACTGGAAGAACGCCGCTCAGCCATCCTCGCCAGC
ATCACCGAACAAGGCAAACTGAACGACCTCATACACGCCGAGATCCTCGCTGCCGACACCAAATCGCGTTTGGAGGACCT
CTATCTCACATACAAACCCAAGCGCCGCACCCGCGCACAGATCGCACGCGAAGCAGGCTTAGAACCATTAGCCGATAGCC
TACTGACTGACCCCACACTGATTCCAGAGACCGTTGCCGCCAACTTTGTCGACCCTGAGAAAGGGATCACCGACATCAAA
ACCGCACTTGAAGGCGCACGTGTAATCCTGATAGAGCGCTGGGGAGAAGATGCCGCTCTGATCGGTGAACTACGTCAATG
GCTCGCCAACAATGGAGTGATTCATGCACGCCTCATCGACAACAAAGAAGACACTGGAGCCAAATACAGAGACTACTTCA
ACCATACCGAACTGCTCTCCAAAATTCCCTCACACCGCCTGCTCGCATTGTTCCGCGCCCGCTCTGAAGAAATACTGCAT
TTAGACCTAGATCCCGGTAATGATGTTGACGCTGGCCATCAATACTGTGAAAGCATGGTCATGCAGGCCACATGTGTCGC
TGACCAAGGGCGCCCAGCGGATACATGGTTAATGACCGCCTGCCGCCTCACCTGGCGTGCCAAACTTCATATGCATTTGA
TGTTGGACCTCTTCAACCAAGCACGAGAAAAAGCCGAAGCAGAAGCAATCACTGTATTCAGCAATAACCTCAAAGATCTC
CTGCTAGCCGCACCGGCTGGACCACGCATCGTTCTGGGGATTGATCCAGGCATCCGCACCGGCTGCAAAATCGCTATCGT
CGACACCACCGGCAAACTGATCGCAACAGAAACAATCTACCCGCACGAGCCGCGGCGCGAGTGGGACAAATCACTACACA
CCCTAAAGACACTCTGCACCCAACATCACGTCACACTGATTGCCATTGGCAATGGCACCGCAAGCCGCGAGACCGACAAA
CTAGTAAGCGACCTGATCAAAGCGCATCCTGCATTGAAACTGCAAAAAATCGTTGTCAGCGAATCAGGAGCCTCCGTCTA
TTCGGCCTCCGAATCCGCCGCTAAAGAATTCCCCAACCTGGATGTCTCCTTACGCGGCGCCGTCTCGATTGCACGCCGCC
TCCAAGATCCGCTAGCTGAACTAGTTAAAATCGACCCCAAAGCAATCGGAGTTGGGCAATACCAACACGACGTCGACCAA
CTTCACCTCGCCAAAGCCCTGGATGCACGTGTAGAAGACTGCGTCAATGCCGTTGGAGTCTATGTCAACACAGCATCCGC
AGCATTGCTATCGCGCGTATCCGGCCTATCTGCGAGCGTCGCCGAAAACATCACTCGCTATCGCGACGAACACGGATCAT
TCAAACAACGCCAAGACCTGCTGAAAGTACCCAGACTCGGCGCAAAGACCTTTGAACAATGCGCCGGATTCCTTCGTATT
GCTGACAGCAACCAACCTCTGGACGCCTCTGCAGTACATCCAGAAGCCTACCCGGTCGTCGAACGCATTGTGCAAACCAC
AGGCAAACCAATCAAAGCATTGATTGGCGATAGCCACACCTTACGCATGCTCAAACCAGAACAATTCACTGACACGAACT
TCGGAATACCAACCATCCGCGACATCATCAAAGAACTAGAAAAACCAGGCCGCGACCCACGTCCAGAATTCAAAGCTGTG
CGATTTACAGAAGGCGTAGAAAACATCAAAGACCTCAAACCAGGCATGATCCTCGAAGGAGTCGTTAGCAACGTCGCCGC
ATTTGGTGCCTTCGTCGATATTGGAGTACACCAAGACGGATTAATTCACATATCAGCCCTAGCGGACCGCTTCGTCAAAG
ACCCACGTGACATTGTCAAAGCGGGCGACATTGTCAAAGTCAAAGTTTTGGAGATTGATTTACCACGCAAACGTATCGCA
CTGACCTGCCGCCTCCATGAAGAAACACCACCAGAAACCCCAGCAGCGAATAGAACTGGCAATGAACGCGGCAGACCCAA
CCCCGTTGCAAAAAAACTCAAAGCCACACCAACCGACAACACACTCGCACAAGCCTTCGCACGTGCACGACTCAAATGA

Protein sequence :
MQNSLLTQHIAQIIATEISSQPTQARAAIALLDEGASVPFIARYRKEATGGLDDTQLRTLETRLTYLRELEERRSAILAS
ITEQGKLNDLIHAEILAADTKSRLEDLYLTYKPKRRTRAQIAREAGLEPLADSLLTDPTLIPETVAANFVDPEKGITDIK
TALEGARVILIERWGEDAALIGELRQWLANNGVIHARLIDNKEDTGAKYRDYFNHTELLSKIPSHRLLALFRARSEEILH
LDLDPGNDVDAGHQYCESMVMQATCVADQGRPADTWLMTACRLTWRAKLHMHLMLDLFNQAREKAEAEAITVFSNNLKDL
LLAAPAGPRIVLGIDPGIRTGCKIAIVDTTGKLIATETIYPHEPRREWDKSLHTLKTLCTQHHVTLIAIGNGTASRETDK
LVSDLIKAHPALKLQKIVVSESGASVYSASESAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVDQ
LHLAKALDARVEDCVNAVGVYVNTASAALLSRVSGLSASVAENITRYRDEHGSFKQRQDLLKVPRLGAKTFEQCAGFLRI
ADSNQPLDASAVHPEAYPVVERIVQTTGKPIKALIGDSHTLRMLKPEQFTDTNFGIPTIRDIIKELEKPGRDPRPEFKAV
RFTEGVENIKDLKPGMILEGVVSNVAAFGAFVDIGVHQDGLIHISALADRFVKDPRDIVKAGDIVKVKVLEIDLPRKRIA
LTCRLHEETPPETPAANRTGNERGRPNPVAKKLKATPTDNTLAQAFARARLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 58