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Name : Xfasm12_1238 (Xfasm12_1238) Accession : YP_001775809.1 Strain : Xylella fastidiosa M12 Genome accession: NC_010513 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1300597 - 1303173 bp Length : 2577 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGCAGAACATACCCCACTGATGAAGCAATACTTCGCCGCCAAGGCTGAGTATCCAGACTTACTTTTGTTCTTCCGTAT GGGAGATTTTTACGAGCTTTTTCATCAAGATGCCCGCAAGGCAGCGCGGTTACTCGATATCACGTTGACTCAGCGGGGTA GTTCCGGTGGTACTCCGATCCCAATGGCCGGTGTACCCGTTCATGCCTATGAAGGCTATTTGGCGCGGCTCATTGCCCTG GGTGAATCCGTTGCGATTTGCGAACAAATTGGAGATCCAGGGCTTGCTAAAGGGTTGGTTGAACGTAAGGTGGTACGCAT CGTCACTCCAGGTACGATCACTGACGAGGCGTTACTGGAGGAGCGTCGCGACACTCTATTGATGGCCTTATCACGCACTA AAAACTGTTATGGCTTGGCTTGGGCTGACTTAGCCGGTGGCCGTTTCCTGGTGAACGAAGTCGATAGCGAGGAGGCATTA GAAGCCGAACTCGCACGTCTGGAGCCAGCTGAGCTGTTACTCCCTGACGAGGATGCATGGCCAGAGTATCTACAGCAGCG CAGCGGTGTGCGTCGCCGTCCCCCATGGTTGTTTGATGCTGACAGCGGCCGCCGTAAATTACTGGCGTTTTTCAAACTGC ACGATTTATCCGGCTTCGGTATCGAAAATAATCCACAAGCTACTGCTGCGGCGGGTGCACTTCTTGGCTACATTGAGGAG ACACAGAAGCAGCGTCTGCCGCATCTGACTTCAATTACGATGGAGACTGTTGGCGAAGCGATTACGATGAACGCTGCCAC ACGTCGCCATTTGGAGCTGGACACCCGTGTGGATGGGGAGAGCCGTCACACCTTGCTTGGGGTGCTCGATAGTACGGTGA CCCCGATGGGCGGACGGTTGCTGCGGCGGTGGCTGCATCGGCCGCTGCGGCTGCGCGAGGTGGTAAGACAACGTCATGCT GCCGTCGGGAGCATGATCTATATCGATCTCGATAACAAACTCAGGGAGACTTTCCGCAGGCTTGGCGACATGGAGCGGAT TTTGACCCGCGTGGCATTGCGCTCAGCACGTCCACGTGACATCTCCACATTACGGGATAGCCTCAGCCTCCTGCCACGTT TACGTGAGCTTCTCAATGCATCGGATTCCCCGCGCTTGCGCGTGTTGTACGCCGAGCTGGGTGAGCATGACAGCACCGCG TCTTTATTGGTAAAAGCCGTCGCAGAACAGCCACCCTTAAAGCTGACTGATGGCGGTGTGATTGCCCCAGAATACGATGT CGAATTGGACGAACTGCGTAAGCTCTCCAACAACGCGGATCAGTTCTTGATTGATCTTGAGACACGCGAGCGTGAATCCA GTGGTATTTCTACGCTGAAAGTCGGTTACAACCGTGTACATGGTTACTATATTGAGATCAGCAAGGGCCAAGCCGACAAA GCACCGGTGCATTACACTCGACGCCAGACACTGACTAACGCCGAGCGCTACATCACGGAGGAACTGAAAGCGTTCGAAGA CAAAGTATTATCCGCGCGTGATCGTGCGTTGGCGCGGGAAAAATTGTTGTACGAACAGCTGCTGGACACCGTCGGGGCGC AACTGGAACCGCTGAAGCGTTGTGCGGCTGCGCTATCTGAGCTAGATGTACTGGTCTGCTTTGCCGAGCGTGCACAGACA TTGGATTGGGCGCGTCCGGAGTTGGAGCATACATCATGCTTGCATATTGAGGGTGGCCGTCACCCGGTTGTGGAAGCCGT GCGTGAACAGCGATTCGAGCCGAATGACATCGATCTTCACCCTGAGCGCCGCATGTTGGTTATCACCGGACCCAATATGG GAGGCAAGTCGACCTACATGCGCCAGAATGCCTTGATTGTCCTGCTTGCTTATATCGGCAGCTACGTTCCGGCCAGCCGC GCGCTGATTGGACCGATTGACCGCATCATGACCCGTATCGGTGCTGGTGATGACCTGGCCCGAGGTCAGTCGACATTTAT GCTTGAGATGACAGAGACCAGCTACATTCTGCACCATGCGACCGCGCAGTCGCTGGTACTGATGGACGAAATTGGTCGGG GGACCTCGACTTACGATGGCTTGGCGTTGGCGGATGCAGTCGCACGCCACTTAGCTCATATCAACCGTTGTTATACGCTG TTTGCTACGCATTATTTTGAGCTGACTGCACTAGCCGACGAAACATATGAGGGAGGTCTGAGCGGTATCGCTAACGTGCA TTTCGATGCTGTCGAGCATAGTGAACGCTTGGTCTTCATGCACACAGTGAAGGATGGCCCGGCCAATCGCAGTTTTGGCC TACAGGTGGCTGCTTTGGCTGGTCTACCAGCTGCGGCCGTCGCACACGCACGGCGGCGTTTAGCTGAACTGGAGCAGCGA GGCCGTGAAAGTCATGTTTCAGAAATAACACCGCTGGCATTGGATGCACCGCAGCAGTGCAGTTTATTTGCGTCGGCGCC CTCAGCAGCTCAGGAAGCATTGGTTGCATTGCATCCGGATGAGTTGACCCCTAAGCAAGCACTAGAAGCGCTTTACCGAC TCAAAGCGCTGCTATAA Protein sequence : MAEHTPLMKQYFAAKAEYPDLLLFFRMGDFYELFHQDARKAARLLDITLTQRGSSGGTPIPMAGVPVHAYEGYLARLIAL GESVAICEQIGDPGLAKGLVERKVVRIVTPGTITDEALLEERRDTLLMALSRTKNCYGLAWADLAGGRFLVNEVDSEEAL EAELARLEPAELLLPDEDAWPEYLQQRSGVRRRPPWLFDADSGRRKLLAFFKLHDLSGFGIENNPQATAAAGALLGYIEE TQKQRLPHLTSITMETVGEAITMNAATRRHLELDTRVDGESRHTLLGVLDSTVTPMGGRLLRRWLHRPLRLREVVRQRHA AVGSMIYIDLDNKLRETFRRLGDMERILTRVALRSARPRDISTLRDSLSLLPRLRELLNASDSPRLRVLYAELGEHDSTA SLLVKAVAEQPPLKLTDGGVIAPEYDVELDELRKLSNNADQFLIDLETRERESSGISTLKVGYNRVHGYYIEISKGQADK APVHYTRRQTLTNAERYITEELKAFEDKVLSARDRALAREKLLYEQLLDTVGAQLEPLKRCAAALSELDVLVCFAERAQT LDWARPELEHTSCLHIEGGRHPVVEAVREQRFEPNDIDLHPERRMLVITGPNMGGKSTYMRQNALIVLLAYIGSYVPASR ALIGPIDRIMTRIGAGDDLARGQSTFMLEMTETSYILHHATAQSLVLMDEIGRGTSTYDGLALADAVARHLAHINRCYTL FATHYFELTALADETYEGGLSGIANVHFDAVEHSERLVFMHTVKDGPANRSFGLQVAALAGLPAAAVAHARRRLAELEQR GRESHVSEITPLALDAPQQCSLFASAPSAAQEALVALHPDELTPKQALEALYRLKALL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-172 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Xfasm12_1238 | YP_001775809.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 54 |
