Gene Information

Name : M446_6413 (M446_6413)
Accession : YP_001773110.1
Strain : Methylobacterium sp. 4-46
Genome accession: NC_010511
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 7046976 - 7047395 bp
Length : 420 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: dvu:DVU2179 ISDvu2, transposase OrfA

DNA sequence :
ATGGATAAGGCTATGGCATCTGATCCGATCGCCCCGCCTCCGCACGGCGAGATCCTGACCGGTGTGCAGCGCCGCCGGCG
GTGGTCCACGGCCGAGAAGATCCGCCTCGTCGAGGAGAGCCAGCAGCCCGGCTCGTCCGTGTCCTTCGTGGCGCGGCGCT
ACGGGCTGTCGCCCAGCCTGCTGTTCCGGTGGAAGCGGCGCTTGCTGGAAGGCGGGCATGCGGCTGTTCAGGCCGATGAG
GAGGTCGTCGGCACCAGCCGGGTGCGCGAGCTGGAGCGGCGCGTGCGGGACTTGGAACGCCTGCTCGGGCGCAAGACCAT
GGAGGTCGAGATCCTCAAGGAGGCGCTCGACCTCGCACGCACAAAAAAACCGACCTTGCCGCTCGTCTCCTGGGGCGGGC
CGGTGGGCGGTTCCCGATGA

Protein sequence :
MDKAMASDPIAPPPHGEILTGVQRRRRWSTAEKIRLVEESQQPGSSVSFVARRYGLSPSLLFRWKRRLLEGGHAAVQADE
EVVGTSRVRELERRVRDLERLLGRKTMEVEILKEALDLARTKKPTLPLVSWGGPVGGSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 4e-13 47
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 3e-13 47
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 2e-13 46
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 2e-13 46
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 3e-13 46
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 3e-13 46
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 3e-13 46
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 2e-13 46
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 1e-12 46
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 1e-12 46
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 8e-13 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M446_6413 YP_001773110.1 transposase IS3/IS911 family protein VFG0648 Protein 1e-13 47
M446_6413 YP_001773110.1 transposase IS3/IS911 family protein VFG0622 Protein 4e-13 46
M446_6413 YP_001773110.1 transposase IS3/IS911 family protein VFG0609 Protein 4e-13 46