Gene Information

Name : M446_0057 (M446_0057)
Accession : YP_001767079.1
Strain : Methylobacterium sp. 4-46
Genome accession: NC_010511
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 64843 - 65520 bp
Length : 678 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bra:BRADO1408 putative two-component response regulator (OmpR family)

DNA sequence : 
ATGCGGATCCTGCTCGTCGAGGACACGCGGGACCTGGGCGAGGCCATCGCGACGCGGCTGCGGGCGCTCGGCCACGCGGT
CGATTGGGAGCGGGACGGCGCGGACGGCGACGCGGCCCTGCAGGTGCAGGCCTACGACCTCGTCATCCTGGACGTGAACC
TGCCCGGCCTCGACGGTTTCTCGGTGCTCAGGCGCCTGCGCGCCCGGCGCGGGCGCAGCCCCGTCCTGGTGCTGACCGCC
CGCTCCGAGGTGGACGACCGGGTCGGCGCCCTCGATCTCGGGGCGGACGACTACCTCGTGAAGCCCTTCGACTTCCGCGA
GCTGGAGGCGCGGGTGCGGGCGCTGCTGCGGCGCCATTCGGGCCACGCCGACAACGCCATCGCGGTGGGCAACCTCGTCC
TCGACCGGGCGGCCCGCAGCGCCCGGGTCGCCGGCCAGCCCCTCGACCTCACCCGCCGGGAATGGACCCTGATGGAGATC
CTGGCGGCCCGGCCCGGCCGGATCTTCGGCAAGGCGGAACTGCTCGAGCGGGTGACGAGCTTCGAGGAGGATGCGAGCGA
GAACGCCGTCGAGCAGATCGTCGCCCGGCTGCGCCGCAAGCTCGCCCAGGCCGGCGCCGAGCCCGAGATCCGCACCCTGC
GCGGGCTCGGCTACCAGGTCGTGTGGCCGCAGACGTGA

Protein sequence : 
MRILLVEDTRDLGEAIATRLRALGHAVDWERDGADGDAALQVQAYDLVILDVNLPGLDGFSVLRRLRARRGRSPVLVLTA
RSEVDDRVGALDLGADDYLVKPFDFRELEARVRALLRRHSGHADNAIAVGNLVLDRAARSARVAGQPLDLTRREWTLMEI
LAARPGRIFGKAELLERVTSFEEDASENAVEQIVARLRRKLAQAGAEPEIRTLRGLGYQVVWPQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-23 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-22 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M446_0057 YP_001767079.1 two component transcriptional regulator BAC0197 Protein 6e-25 44
M446_0057 YP_001767079.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-24 43
M446_0057 YP_001767079.1 two component transcriptional regulator BAC0083 Protein 2e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M446_0057 YP_001767079.1 two component transcriptional regulator VFG0596 Protein 1e-23 44
M446_0057 YP_001767079.1 two component transcriptional regulator VFG1389 Protein 5e-24 41