Gene Information

Name : M446_5060 (M446_5060)
Accession : YP_001771821.1
Strain : Methylobacterium sp. 4-46
Genome accession: NC_010511
Putative virulence/resistance : Virulence
Product : IucA/IucC family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 5544019 - 5545866 bp
Length : 1848 bp
Strand : -
Note : PFAM: IucA/IucC family protein; KEGG: oan:Oant_3255 IucA/IucC family protein

DNA sequence :
GTGAGCGCGGGCGTGCCGCGCCCGCCGGAGGGGCAGCGCGGGCCCGGCCTCGGCCCGCTGCCGGGCGGCGCGCCGGTCGG
CGCCGCGCTGTGGCTGCGCCTCAACCGCGCGGTGATCGCCAAGGCGATCAGCGAACTCGCCTTCGAGGAGGCGCTCGCGC
CGGAGCCGACCGACGCGGCGGGCACGCGCTGGGCGCTGCGCCTGCCGGGCGGCGTCGCCTACCGCTTCACCGCCGCGCGC
CGGATCTGGGGCAACCTCGCGATCGACCCGGAGAGCCTCCTGCGCGAGGAGGGCGGGCGGCCGGTCCCGGCCGGGGACGC
GCCGGGATTCTTGGTCGACGCGCGCGAGCCGCTCGGCATCGCGCCCGACACCCTCTGCACCTACGTGCAGGAACTGTACA
GCACGCTCGCGGCCGACGCGCGGATCGCCGCCGCGGGCGAGGGGGCCGACCTCCTCGCCCTGCCCGAGCGGATGGTGCAG
CAAGTCCTCGACGGGCACCCGAAGGCCCCGGCGAGCAAGGGCCGGATCGGCTGGGGCTTGGCGGATTTCGAGGCCTACGC
GCCGGAGTTCCGGGCGGGCGTGCGGCTCGTCTGGGCCGCCGCCGACCGCGCGGCCTGCCGCCTGACGCTGGAGCCGGGCC
TCGACGAGGCGGCGCTCGTCGCCGACGCCCTCGACCCCGCCGAGCGGGCGCGCCTCGCGCAGGCCTGCCGGACGCGAGGG
CTCGGGCTCGACCGGTTCCTGCTCCTGCCGATCCATCCCTGGCAGTGGGACCGGGTGATCGCGTTCCAGTTCGCGGGCGA
GATCGCGGCGGGGCGCCTCGTTCCCCTGGGGGTCTTCGGCAGCCCCTTCCTGCCGCAGCAATCGCTGCGCACCCTGGCCG
GCAGCGACCCGGCCGCGCGCCTCGACGTGAAGCTCGCGCTGACGGTGCTCAACACCTCGGCGTGGCGCGGCGTGCCCGGC
AAGTACATGGCGATCGGCCCGGCCCTCTCGGGCTGGCTCGCCGAGCGGGCGGCGCGCGACCCGGCGCTCGCCGGCACGAT
CGTCCTGCGCGAGCGCGCCGGCGCCTTCTACCCGCACCCCGTCCACGAGCGGGTGGCGGACGCGCCCTATCAGCACCGGG
AGATGCTCGGCGCGATCTGGCGCGACGCCGTCGCGGCGCGGCTCGGCGCGGGCGAGCAGGCGCTGATGATGGGCGCGCTG
ACCAAGCGGGGCGCGGACGGCCGGCCGCTCGTGAGCGCGCTCGTCGCCAGGTCCGGCCTCGGGGCGGAGGCGTGGCTGGA
GCACCTGTTCGCGCGCGTCGCGGTGCCGCTCTACCACTTCCTGTGCCGCTACGGCGTCGGCTTCGTCGCGCACGGCCAGA
ACGTGACCCTGGTGCTGCGGGACGCGGTGCCCTGCGGGGTCGCGCTCAAGGATTTCCAGGGCGATTGCGACCTCGTCGAC
CAGGATTTCCCGGAGGCGGGGGACCTGCCCGAGGGCGTGCGCGAGACGCTGCTGCGCCGGCCCGCCGCGCACCTCCTGCA
GCACCTCCAGACGGGGCACTTCGCGAGCGTGCTGCGCTTCGTCTCGGACGCGCTCGCCCAGCACGACGGCCTCCCGGAGA
TCCGGTTCTACGCGGCGCTCGCCCGGGTGCTGCGCCGCTACCAGGCGGCCCATCCCGACCTCGCCGGACGCTTCGCCCTC
TTCGACCTCTTCGCGCCGACGGTGCCGCGCGTGTGCATCAACCGCGTGCGCCTCGCCCTCGGCTACGGCGCGTCGAGCCA
GCGTCCCGTCCCGCGGACGGGCAGCCCCCTCCTCAACCCCCTCCACCGGGCCGAGCAGGCCGCAGCCGCAGGAGCGCGCG
CACAGTGA

Protein sequence :
MSAGVPRPPEGQRGPGLGPLPGGAPVGAALWLRLNRAVIAKAISELAFEEALAPEPTDAAGTRWALRLPGGVAYRFTAAR
RIWGNLAIDPESLLREEGGRPVPAGDAPGFLVDAREPLGIAPDTLCTYVQELYSTLAADARIAAAGEGADLLALPERMVQ
QVLDGHPKAPASKGRIGWGLADFEAYAPEFRAGVRLVWAAADRAACRLTLEPGLDEAALVADALDPAERARLAQACRTRG
LGLDRFLLLPIHPWQWDRVIAFQFAGEIAAGRLVPLGVFGSPFLPQQSLRTLAGSDPAARLDVKLALTVLNTSAWRGVPG
KYMAIGPALSGWLAERAARDPALAGTIVLRERAGAFYPHPVHERVADAPYQHREMLGAIWRDAVAARLGAGEQALMMGAL
TKRGADGRPLVSALVARSGLGAEAWLEHLFARVAVPLYHFLCRYGVGFVAHGQNVTLVLRDAVPCGVALKDFQGDCDLVD
QDFPEAGDLPEGVRETLLRRPAAHLLQHLQTGHFASVLRFVSDALAQHDGLPEIRFYAALARVLRRYQAAHPDLAGRFAL
FDLFAPTVPRVCINRVRLALGYGASSQRPVPRTGSPLLNPLHRAEQAAAAGARAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 5e-91 43
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 5e-91 43
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 3e-91 43
iucC AAK71633.1 IucC Virulence SHI-3 Protein 1e-90 43
iucC AAD44748.1 IucC Virulence SHI-2 Protein 1e-90 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M446_5060 YP_001771821.1 IucA/IucC family protein VFG0617 Protein 2e-91 43
M446_5060 YP_001771821.1 IucA/IucC family protein VFG1083 Protein 8e-91 43
M446_5060 YP_001771821.1 IucA/IucC family protein VFG0938 Protein 1e-91 43