Gene Information

Name : rph (M446_4253)
Accession : YP_001771036.1
Strain : Methylobacterium sp. 4-46
Genome accession: NC_010511
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4694171 - 4694884 bp
Length : 714 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCATCCAAGCGTGCGCCCGACGAACTGCGCAAGGTCACGCTGGAGAAGGGTGTCGCCCGCTACGCCGAAGGCTC
CTGCCTCGTCACCTTCGGGGAGACCAAGGTGCTGTGCACGGCGTCCCTGGAGGAGCGCGGCCCGCCCTGGCTGCGCGGCT
CGGGCAAGGGCTGGGTCACGGCCGAGTACGCCATGCTCCCGCGCGCCACGCACGAGCGCAACCGGCGCGAGGTCACGGCC
GGCAAGCCCTCCGGCCGCACCCAGGAGATCCAGCGCCTGATCGGCCGCTCGCTGCGGGCCGTGGTCAACCTGCCCGCCAT
CGGCGAGCGTCAGATCGTCGTCGATTGCGACGTGCTGCAGGCGGATGGCGGCACCCGCACCGCCTCGATCACCGGCGCCT
GGGTCGCCCTGCACGAGTGCTTCACCTGGATGCGCGGGCGCTCGATCATCTCGGTCGACCCGATGCGCGACCACGTGGCG
GCGATCTCCTGCGGCATCCACAAGGGGATTCCGATCCTCGACCTCGACTATGACGAGGATTCGGCCGCCGACACGGACGC
CAATTTCGTGATCACCGGCTCGGGCGGCATCGTCGAGGTGCAGGGCACCGCCGAGATCGCGCCGTTCTCGGAGGAGCAGT
TCCTCGGGCTGCTGCGGCTCGCCAAGGCGGGCGTGGCGCAGCTCGTCGCGCTCCAGAAGCAGGCGGTGGGCTAG

Protein sequence :
MRPSKRAPDELRKVTLEKGVARYAEGSCLVTFGETKVLCTASLEERGPPWLRGSGKGWVTAEYAMLPRATHERNRREVTA
GKPSGRTQEIQRLIGRSLRAVVNLPAIGERQIVVDCDVLQADGGTRTASITGAWVALHECFTWMRGRSIISVDPMRDHVA
AISCGIHKGIPILDLDYDEDSAADTDANFVITGSGGIVEVQGTAEIAPFSEEQFLGLLRLAKAGVAQLVALQKQAVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 5e-53 51