Gene Information

Name : fliI (M446_3947)
Accession : YP_001770747.1
Strain : Methylobacterium sp. 4-46
Genome accession: NC_010511
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 4395326 - 4396681 bp
Length : 1356 bp
Strand : +
Note : involved in type III protein export during flagellum assembly

DNA sequence :
ATGGGGCAGGAAGGCGGGGGGGCGGGGCGGCTCGCGGCGGCCCGGGCGGCGCTCGACGGGGTCGAGACCCTGGAGGTGTT
CGGCCGGGTCGTGGCGATCCGCGGGCTCCTCGTGGAGGTGGCCGGCCCGGTCGCGGCGATGCGGCTCGGTGGGCGGCTCG
ACATCGCCGTGGAGGGGCGCGGCGGCGAGGGCAGCGTGCCCTGCGAGATCATCGGCTTCTCGGGGTCCCACGCCCTGGCG
ATGCCGTTCGGGTCGCTCCAGGGCGTGCGCCGGGGCTGCCCGGCCCGGGTGGGCGCCGAGGAGGCGGGGGCGATCCGGCC
GTCCCCGGCCTGGCTCGGGCGGGTGGTCGACGCGCTCGGGCGGCCCGTCGACGGGCGCGGGCCGCTGCCGCCGGGACCGC
TCCCCTATCCGCTCCGCGCCGACCCGCCGCCCGCCCACGCGCGGGCCCGGGTCGGGCCGCCCCTCGACCTCGGGGTGCGC
TGCATCAACACCTTCCTGACCATGTGCGTGGGCCAGCGGATGGGCATCTTCGCCGGCTCGGGCGTGGGCAAGTCGGTGCT
GCTCTCGATGCTCGCCCGGGCCGCCGCCTGCGACGTGGCGGTGATCGGCCTCGTCGGCGAGCGCGGCCGCGAGGTGCAGG
AATTCCTGCAGGACGATCTCGGCCCCGAGGGCCTCGCCCGCTCCGTGGTGGTGGTGGCGACCTCCGACGAGCCGGCGCTG
ATGCGCCGCAACGCCGCCTACGTCACCCTCGCGCTCGCCGAGTCTTTTCGCGACGCGGGCGCGCAGGTGCTCTGCATGAT
CGACTCGGTCACCCGCTTCGCCATGGCGCAGCGGGACGTGGGCCTCGCGGCCGGCGAGCCGCCCACCGCCAAGGGCTACA
CGCCGACCGTGTTCAGCGAGCTGCCGCGCCTGCTGGAGCGGGCGGGGCCCGGCACCGGGGCGGGCTCCATCTCCGGCCTG
TTCACGGTGCTGGTCGAGGGCGACGACCACAACGAGCCCGTCGCCGACGCGGTGCGCGGCATCCTCGACGGCCACATCGT
GATGGAGCGGCGGATCGCCGAGGGCGGGCGCTACCCGGCGATCAACGTGCTGCGCTCGGTCTCCCGCACCATGCCGCGCG
CCTGCGACCCGGCCTTCCTGCCGACGGTGCAGCGCGCGCGCTGGCTCCTCTCCACCTACGCCGACATGGAGGAACTGATC
CGCCTCGGCGCCTACCGGCCGGGCTCCTCGCCCGACGTCGACGAGGCGATCGGCCTGATGCCCGACCTGGAGGCTTTTAT
GAGGCAGGGTAAGGAAGAAGCAACCTCCCTGGGGGAAGGATACCAGCGCCTGGCGGCGATCGTCGGCGGGCCCTGA

Protein sequence :
MGQEGGGAGRLAAARAALDGVETLEVFGRVVAIRGLLVEVAGPVAAMRLGGRLDIAVEGRGGEGSVPCEIIGFSGSHALA
MPFGSLQGVRRGCPARVGAEEAGAIRPSPAWLGRVVDALGRPVDGRGPLPPGPLPYPLRADPPPAHARARVGPPLDLGVR
CINTFLTMCVGQRMGIFAGSGVGKSVLLSMLARAAACDVAVIGLVGERGREVQEFLQDDLGPEGLARSVVVVATSDEPAL
MRRNAAYVTLALAESFRDAGAQVLCMIDSVTRFAMAQRDVGLAAGEPPTAKGYTPTVFSELPRLLERAGPGTGAGSISGL
FTVLVEGDDHNEPVADAVRGILDGHIVMERRIAEGGRYPAINVLRSVSRTMPRACDPAFLPTVQRARWLLSTYADMEELI
RLGAYRPGSSPDVDEAIGLMPDLEAFMRQGKEEATSLGEGYQRLAAIVGGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-71 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-71 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-72 45
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-72 45
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 9e-73 45
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-71 45
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-72 45
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-72 45
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 8e-72 45
escN AAC31513.1 L0034 Virulence LEE Protein 6e-62 44
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-62 44
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 6e-62 44
escN AAK26715.1 EscN Virulence LEE Protein 3e-62 44
escN AAL57542.1 EscN Virulence LEE Protein 3e-62 44
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-62 44
escN NP_290268.1 hypothetical protein Virulence LEE Protein 8e-62 44
escN CAI43874.1 EscN protein Virulence LEE Protein 1e-62 44
ECs4568 NP_312595.1 EscN Virulence LEE Protein 8e-62 44
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-62 44
escN YP_003236088.1 translocator EscN Virulence LEE Protein 4e-62 44
escN AAC38383.1 EscN Virulence LEE Protein 9e-62 44
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-62 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-61 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 8e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_001770747.1 flagellum-specific ATP synthase VFG2499 Protein 2e-71 47
fliI YP_001770747.1 flagellum-specific ATP synthase VFG2144 Protein 3e-73 46
fliI YP_001770747.1 flagellum-specific ATP synthase VFG1254 Protein 1e-75 46
fliI YP_001770747.1 flagellum-specific ATP synthase VFG0048 Protein 5e-74 45
fliI YP_001770747.1 flagellum-specific ATP synthase VFG2331 Protein 1e-74 45
fliI YP_001770747.1 flagellum-specific ATP synthase VFG0812 Protein 4e-62 44
fliI YP_001770747.1 flagellum-specific ATP synthase VFG0730 Protein 5e-62 44