Gene Information

Name : M446_2520 (M446_2520)
Accession : YP_001769402.1
Strain : Methylobacterium sp. 4-46
Genome accession: NC_010511
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2793683 - 2794645 bp
Length : 963 bp
Strand : -
Note : PFAM: Integrase catalytic region; KEGG: bcn:Bcen_5102 integrase, catalytic region

DNA sequence : 
ATGGATCTGACGAAGGCGCGTCTGGGATGGATTGAACTCTATGCCCAGACCGGCGACGCCGGCCTCGTTTGCCGCCGCTG
CGGCATCTCACGCCCGACGTTGCGCAAGTGGTGGCGGAGGTATCAGGCCGCTGGTCCAGCTGGGCTGGTGGAACACAGCC
GCCGTCCGCGACGCTTGGCAGCTCAGAAGGTGTTTGCAGAGCACGAGACGCTGATCCTCAGCCTCCGACGCGACCGCAAG
CTCGGGATCAAGCAGCTCCGCAATGAGCTCGTCCGTCAGCACGATCTGACGCTGTCGCTCGACACCATCCATCGCGTGCT
CGTCCGTCACGGCGAGCAAGTGCTCAAGCGACCGCGGCGGCGCGTCAGAGGGAAGCTCCGCTATAGTCGACCCGTGCCGG
GCGATCGGGTGCAGATGGACGTCTGCAAAATCTGCCCGGGTGTGTACCAGTACACCGCCATAGATGACTGCTCGCGCTAC
GCCGTGTTGGGGATCTATCCACGCCGGACCGCCGCGAACACTCTCGATTTTCTCGACCGCGTGATCGAGGAGATGCCGTT
TGCCATTCAGCGGATCCAGACCGACCGCGGACGCGAATTCTTTGCCGAGGCTGTGCAGCAGCGGCTGATCGACTGGGGCA
TCAAGTTCCGCCCGATCCCGCCACGATCGCCCCATCTGAATGGCAAGGTCGAGCGCAGCCATCGCGCCGCTCTTGAGGAG
TTCTGGACCACTGTGGATCCGAAATCCGCGGACATCGCCGACCGCGTGGCCGAGTGGCAGCATCACTGGAACTGGAGCCG
CCCCCATTCGGCGCTTGATGGCGCATCTCCCATCGACCGGGTGGCTGAACGCTCGGACCAGACGCCGCTCCGAGAAGAGG
TGGAAGCCCTCTTCGACCCCGCTAAAGCGCGCATCCGTCATCCGGACTACCGCATCGATCAGGCCTTGGCCGCGGTGAAA
TGA

Protein sequence : 
MDLTKARLGWIELYAQTGDAGLVCRRCGISRPTLRKWWRRYQAAGPAGLVEHSRRPRRLAAQKVFAEHETLILSLRRDRK
LGIKQLRNELVRQHDLTLSLDTIHRVLVRHGEQVLKRPRRRVRGKLRYSRPVPGDRVQMDVCKICPGVYQYTAIDDCSRY
AVLGIYPRRTAANTLDFLDRVIEEMPFAIQRIQTDRGREFFAEAVQQRLIDWGIKFRPIPPRSPHLNGKVERSHRAALEE
FWTTVDPKSADIADRVAEWQHHWNWSRPHSALDGASPIDRVAERSDQTPLREEVEALFDPAKARIRHPDYRIDQALAAVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAC12272.1 putative transposase Not tested VPI Protein 1e-82 57
unnamed AAK20746.1 putative transposase Not tested VPI Protein 1e-82 57
unnamed AAK20775.1 putative transposase Not tested VPI Protein 1e-82 57
VC0817 NP_230466.1 transposase Not tested VPI-1 Protein 1e-82 57
VC0395_A0341 YP_001216297.1 transposase Not tested VPI-1 Protein 1e-82 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M446_2520 YP_001769402.1 integrase catalytic subunit VFG0081 Protein 6e-83 57