Gene Information

Name : Bcenmc03_0922 (Bcenmc03_0922)
Accession : YP_001764221.1
Strain :
Genome accession: NC_010508
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1019376 - 1020497 bp
Length : 1122 bp
Strand : -
Note : KEGG: bur:Bcep18194_A4064 riboflavin biosynthesis protein RibD/riboflavin-specific deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein

DNA sequence :
ATGTTCTCGGATACCGACTTCGCCCACATGCAGCGCGCGCTCGCGCTCGCGGCGCGCGGCATGTACACGACCGCGCCGAA
TCCGCGCGTCGGCTGCGTGATCGTCAAGGACGGCGACGTGATCGGCGAAGGCTTCACGCAGCCGGCCGGCCAGGACCACG
CGGAAGTGCAGGCGCTCAAGGACGCGCGTTCGCGCGGCTACGACGTCGCGGGCTCGACCGTCTACGTGACGCTCGAACCG
TGCAGCCATTTCGGCCGCACGCCGCCGTGCGCGAACGCGCTGATCGACGCGCGCGTCGCGAAGGTCGTCGCCGCGATGGA
AGACCCGAACCCGCAGGTGTCGGGGCGCGGCCTCGGCATGCTGCGCGACGCGGGTATCGACGTGCGCTGCGGGCTGCTCG
CGCATGAAGCCGGCGAGCTGAACATCGGCTTCGTGTCGCGGATGACGCGCGGCCGCCCGTGGGTGCGGATGAAGACCGCC
GCGTCGCTCGACGGCCGCACCGCGCTGCCGTCCGGCGAAAGCCAGTGGATCACCGGCGAGGCCGCGCGCCTCGACGGGCA
CGCATGGCGCGCCCGGGCCTGCGCGATCCTCACCGGTATCGGCACCGTGCGCGAGGACAATCCTCTGCTGACCGTGCGCG
GCATCGACACGCCGCGCCAGCCGCAACGCATCCTGGTGGACAGCCGCCTCGACCTGCCGCTCGACGCGCGGCTGCTCGAA
GGCGCGCCGTTGCTGATCTTCTGCGGCCGGCTCGACGCCGCCGGCGAACTGCGCGCGAACGTGCTGAAGTCGCGCGGCGC
GGAAATCGTGCCGCTCGCGAATGCGCACGGCAAGGTCGACCTGCCCGCGATGCTGGCGGCGCTCGGTGCGCGCGGCGTCA
ACGAGCTGCACGTCGAGGCCGGCCACAAGCTGAACGGTTCGCTGCTGCGCGAACGCTGCGTCGACGAATTGCTGGTGTAT
CTGGCGCCGAGCCTGCTGGGCGCCGACGCGGCCGGCATGTTCGATCTCGCCGCGCCGGCCAGCCTCGAGGCGCGCACCCG
GCTGTCGTTCCACGGTATCGAGCGGATCGGCGACGACCTGCGCATCCTCGCGCGTGTCGCACCGACCGACACGTCTCACT
GA

Protein sequence :
MFSDTDFAHMQRALALAARGMYTTAPNPRVGCVIVKDGDVIGEGFTQPAGQDHAEVQALKDARSRGYDVAGSTVYVTLEP
CSHFGRTPPCANALIDARVAKVVAAMEDPNPQVSGRGLGMLRDAGIDVRCGLLAHEAGELNIGFVSRMTRGRPWVRMKTA
ASLDGRTALPSGESQWITGEAARLDGHAWRARACAILTGIGTVREDNPLLTVRGIDTPRQPQRILVDSRLDLPLDARLLE
GAPLLIFCGRLDAAGELRANVLKSRGAEIVPLANAHGKVDLPAMLAALGARGVNELHVEAGHKLNGSLLRERCVDELLVY
LAPSLLGADAAGMFDLAAPASLEARTRLSFHGIERIGDDLRILARVAPTDTSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-59 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-59 44